Table 5.
r | Maximum degree | Number | The proportion of proteins/the number of interactions (non-interactions) | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1<degree<10 | 10<degree<20 | 20<degree<30 | 30<degree<50 | 50<degree<70 | 70<degree<80 | 80<degree<100 | 100<degree<150 | degree>150 | |||||
S. cerevisiae | Positive | 6.8763 | 252 | 4382 | 0.7976/0.3418 | 0.1130/0.2131 | 0.0436/0.1372 | 0.0299/0.1429 | 0.0087/0.0667 | 0.0014/0.0132 | 0.0030/0.0341 | 0.0025/0.0382 | 0.0005/0.0128 |
NIP-SS-NonControl | 8.0493 | 1439 | 3814 | 0.8589/0.2841 | 0.0679/0.1092 | 0.0260/0.0723 | 0.0207/0.0905 | 0.0105/0.0680 | 0.0029/0.0238 | 0.0026/0.0259 | 0.0042/0.0524 | 0.0063/0.2739 | |
NIP-SS | 7.9391 | 154 | 3861 | 0.8052/0.3406 | 0.0873/0.1248 | 0.0303/0.0863 | 0.0544/0.2381 | 0.0080/0.0492 | 0.0049/0.0402 | 0.0028/0.0272 | 0.0065/0.0851 | 0.0005/0.0085 | |
Sub | 12.7178 | 105 | 2516 | 0.6355/ 0.2302 | 0.2134/0.2196 | 0.0254/0.0467 | 0.0552/0.1928 | 0.0672/0.2902 | 0.0016/0.0089 | 0.0012/0.0085 | 0.0004/0.0031 | 0/0 | |
Random method | 6.8781 | 18 | 4381 | 0.8274/0.7327 | 0.1726/0.2673 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | |
H. sapiens | Positive | 1.8146 | 31 | 2384 | 0.9727/0.8470 | 0.0243/0.1262 | 0.0025/0.0219 | 0.0004/0.0049 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 |
NIP-SS-NonControl | 2.9263 | 312 | 1709 | 0.9427/0.4741 | 0.0234/0.0866 | 0.0164/0.1043 | 0.0053/0.0514 | 0.0070/0.1067 | 0.0018/0.0343 | 0/0 | 0.0029/0.0961 | 0.0006/0.0465 | |
NIP-SS | 2.7760 | 30 | 1777 | 0.9572/0.8012 | 0.0315/0.1250 | 0.0113/0.0738 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | |
Sub | 6.5563 | 39 | 888 | 0.7331/0.3221 | 0.1486/0.2697 | 0.1002/0.3279 | 0.0180/0.0803 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | |
Random method | 2.0212 | 9 | 2221 | 1.0000/1.0000 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | |
M. musculus | Positive | 0.9473 | 24 | 948 | 0.9926/0.9450 | 0.0063/0.0411 | 0.0011/0.0139 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 |
NIP-SS-NonControl | 1.9025 | 99 | 636 | 0.9513/0.5929 | 0.0299/0.1389 | 0.0110/0.0882 | 0.0016/0.0169 | 0.0016/0.0275 | 0.0016/0.0380 | 0.0031/0.0977 | 0/0 | 0/0 | |
NIP-SS | 2.0163 | 20 | 612 | 0.9624/0.8212 | 0.0376/0.1788 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | |
Sub | 6.0190 | 52 | 263 | 0.7262/0.1446 | 0.1901/0.3857 | 0/0 | 0.0798/0.4415 | 0.0038/0.0282 | 0/0 | 0/0 | 0/0 | 0/0 | |
Random method | 1.2678 | 8 | 814 | 1/1 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 |