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. 2018 Dec 31;13(12):e0209772. doi: 10.1371/journal.pone.0209772

Table 2. Sample diversity.

Sample Name Cell # at start culture Culture time (days) Cell isolation Storage compound Storage time (days) Storage temp. (°C) Extraction method RNA total (μg) A260/A280 A260/A230
1 3D Fib-Alg 1 5.00E+05 3 Trizol Trizol 0 N/A Trizol 7.51 1.477 0.389
2 3D Fib-Alg 2 5.00E+05 3 Trizol Trizol 0 N/A Trizol 9.67 1.487 0.448
3 3D Fib-Alg 3 5.00E+05 3 Trizol Trizol 0 N/A Trizol 10.42 1.495 0.424
4 3D Fib 1 5.00E+05 3 Trizol Trizol 0 N/A Trizol 12.43 1.519 0.380
5 3D Fib 2 5.00E+05 3 Trizol Trizol 0 N/A Trizol 12.42 1.524 0.406
6 3D Fib 3 5.00E+05 3 Trizol Trizol 0 N/A Trizol 12.55 1.553 0.394
7 Cells 48w 1 5.00E+05 3 Trizol Trizol 0 N/A Trizol 12.27 1.520 0.412
8 Cells 48w 2 5.00E+05 3 Trizol Trizol 0 N/A Trizol 14.92 1.536 0.432
9 Cells 48w 3 5.00E+05 3 Trizol Trizol 0 N/A Trizol 9.84 1.467 0.403
10 Beads 1 5.00E+05 3 Trizol Trizol 0 N/A Trizol 12.97 1.507 0.442
11 Beads 2 5.00E+05 3 Trizol Trizol 0 N/A Trizol 12.07 1.513 0.418
12 Beads 3 5.00E+05 3 Trizol Trizol 0 N/A Trizol 10.39 1.484 0.411
13 Cells 12w 1 5.00E+05 3 Trizol Trizol 0 N/A Trizol 7.50 1.490 0.504
14 Cells 12w 2 5.00E+05 3 Trizol Trizol 0 N/A Trizol 8.47 1.461 0.392
15 Cells 12w 3 5.00E+05 3 Trizol Trizol 0 N/A Trizol 12.52 1.541 0.433
16 I.A3 1.00E+05 3 RLT RLT 0 N/A Rneasy 2.16 2.018 1.550
17 I.B4 1.00E+05 3 RLT RLT 7 -80 Rneasy 2.52 2.047 1.563
18 I.B3 1.00E+05 3 RLT RLT 7 -20 Rneasy 2.46 2.053 1.237
19 I.C4 1.00E+05 3 RLT RLT 30 -80 Rneasy 2.13 2.272 0.061
20 I.C3 1.00E+05 3 RLT RLT 30 -20 Rneasy 2.83 2.095 0.421
21 I.A2 1.00E+05 3 Trizol Trizol 0 N/A Trizol 1.93 2.125 1.088
22 I.B2 1.00E+05 3 Trizol Trizol 7 -80 Trizol 2.65 2.056 1.931
23 I.B1 1.00E+05 3 Trizol Trizol 7 -20 Trizol 1.16 2.054 1.362
24 I.C2 1.00E+05 3 Trizol Trizol 30 -80 Trizol 0.92 2.035 0.669
25 I.C1 1.00E+05 3 Trizol Trizol 30 -20 Trizol 3.28 2.046 1.564
26 II.A3 1.00E+05 3 Trypsin RLT 0 N/A Rneasy 2.39 2.046 1.730
27 II.B4 1.00E+05 3 Trypsin RLT 7 -80 Rneasy 2.73 2.105 1.345
28 II.B3 1.00E+05 3 Trypsin RLT 7 -20 Rneasy 3.51 2.081 1.804
29 II.C4 1.00E+05 3 Trypsin RLT 30 -80 Rneasy 1.69 2.156 0.679
30 II.C3 1.00E+05 3 Trypsin RLT 30 -20 Rneasy 2.59 2.092 1.031
31 III.B4 1.00E+05 3 Trypsin RNAlater 7 -80 Rneasy 1.47 2.160 0.991
32 III.B3 1.00E+05 3 Trypsin RNAlater 7 -20 Rneasy 1.99 2.059 1.261
33 III.C4 1.00E+05 3 Trypsin RNAlater 30 -80 Rneasy 1.24 2.134 0.597
34 III.C3 1.00E+05 3 Trypsin RNAlater 30 -20 Rneasy 1.42 2.126 0.587
35 III.B2 1.00E+05 3 Trypsin RNAlater 7 -80 Trizol 0.02 27.025 0.034
36 III.B1 1.00E+05 3 Trypsin RNAlater 7 -20 Trizol 1.80 2.071 1.517
37 III.C2 1.00E+05 3 Trypsin RNAlater 30 -80 Trizol 1.21 1.969 0.990
38 III.C1 1.00E+05 3 Trypsin RNAlater 30 -20 Trizol 2.54 2.041 1.624
39 II.A2 1.00E+05 3 Trypsin Trizol 0 N/A Trizol 2.88 2.021 1.540
40 II.B2 1.00E+05 3 Trypsin Trizol 7 -80 Trizol 2.93 2.069 1.861
41 II.B1 1.00E+05 3 Trypsin Trizol 7 -20 Trizol 1.68 2.026 1.449
42 II.C2 1.00E+05 3 Trypsin Trizol 30 -80 Trizol 1.42 2.045 1.706
43 II.C1 1.00E+05 3 Trypsin Trizol 30 -20 Trizol 3.10 2.044 2.017

Samples were obtained from MSC-hTERT (1–15) and UC-MSC (16–43) cultured at different cell densities, stored at different temperatures and time, and using different extraction methods. Yield, A260/280, and A260/A230 ratios are given. N/A; Not Applicable.