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. 2019 Jan 1;6:1. doi: 10.1038/s41438-018-0066-6

Table 1.

RNA-sequencing datasets

Reference RNA-seq
Bot. variety crispum crispum latifolium
Cultivars “Domari” “Domari” “Imari” “Myrna” “Confiance” “Flester”
Tissuesa A, S, L, R L L L L L
Stagesb T, H H H H H H
Replicates 2 2 3 3 3
Read types 2 × 100 bp 1 × 50 bp 1 × 50 bp 1 × 50 bp 1 × 50 bp 1 × 50 bp
Raw reads 246,347,186 19,975,333 20,846,549 10,836,889 23,364,091 22,375,987
HQR (%)c 97.2 98.3 97.4 98.3 98.9 98.1

aA, apexes; S, stems; L, leaves; R, roots

bT, transplant; H, harvest

cHigh-quality reads, mean values for each group of replicates are reported