Table 2.

Transcript abundance, expressed in log₂ FC, of five histone acetyltransferases GCN5 (SlHAG8, SlHAG15, SlHAG17, SlHAG18 and SlHAG20), a histone demethylase (HDM) of the Jumonji family (SlJMJ5), a RNA-directed DNA methylation 1 gene (SlRdM1) and a Argonaute slicer (SlAGO4-like) observed in tomato roots after 24, 48 and 72 h of interaction with T. harzianum T22

Gene abbreviation	iTAG 2.4 ID	Log2 FC
		24 hpi	48 hpi	72 hpi
SlHAG8	Solyc03g116860	−1.69	−0.39	−0.13
SlHAG15	Solyc00g272810	−1.25	−0.93	−1.02
SlHAG17	Solyc08g068280	2.37	−0.14	−1.63
SlHAG18	Solyc12g096840	−2.10	−0.72	0.92
SlHAG20	Solyc08g068710	0.40	0.54	1.25
SlJMJ5	Solyc08g076390	0.14	0.34	1.23
SlRDM1	Solyc09g082480	6.30	3.75	1.84
SlAGO4-LIKE	Solyc06g073530	−5.24	−2.99	−1.17

For each gene, the iTAG (version 2.4) ID is reported. FC values below the ±1.1 threshold or not satisfying the FDR cutoffs are shown in italic