Table 2.
Differentially expressed genes (DEGs) encoding wall-associated kinases (WAKs) during infection by Pythium ultimum
| log2FC per genotype and timepoint | ||||||
|---|---|---|---|---|---|---|
| Genes | B.9-24 | B.9-48 | B.9-72 | G.935-24 | G.935-48 | G.935-72 |
| MDP0000230524 | 2.0 | 1.2 | 1.7 | |||
| MDP0000186304 | 1.3 | 1.7 | 1.7 | |||
| MDP0000183195 | 1.9 | |||||
| MDP0000281090 | 1.8 | 1.2 | ||||
| MDP0000426154 | 2.2 | 1.4 | ||||
| MDP0000251865 | 1.8 | |||||
| MDP0000656197 | 1.5 | |||||
| MDP0000170906 | 1.7 | 1.3 | ||||
| MDP0000567084 | 2.0 | 1.2 | 1.4 | 2.3 | ||
| MDP0000317025 | 3.9 | |||||
| MDP0000153539 | 3.3 | 1.7 | 1.6 | |||
| MDP0000206106 | 1.3 | |||||
| MDP0000267001 | 3.4 | 1.6 | 2.8 | |||
| MDP0000562934 | −1.2 | |||||
| MDP0000681106 | 1.0 | |||||
| MDP0000240979 | 1.0 | |||||
| MDP0000247933 | 1.0 | |||||
| MDP0000236093 | 2.1 | |||||
The values of log2FC ≥ 1 and p-adj values ≤ 0.05. were used as selecting criteria of DEGs using the method described in MM. The symbol “−” in front of the number indicates the downregulation in infected root as compared with mock-inoculation control