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. 2018 Sep 21;6(4):96. doi: 10.3390/microorganisms6040096

Table 2.

Total number of reads during each step of microbiome data (16S/ITS) analysis.

Data Number of Samples Input Reads Filtered Reads Denoised and Merged OTUs
16S data
Set1 213 16113978 10874688 7795650 13521
Set2 45 7460569 5294234 3866297 4581
ITS data
Set1 213 14780926 13600570 9900482 10162
Set2 45 6683219 4564572 2450315 3164