Table 2. Common transcriptome resources.
| Website | Laboratory | Reference | Focus |
|---|---|---|---|
| http://igc1.salk.edu:3838/astrocyte_aging_transcriptome/ | Allen | Boisvert et al., 2018 | Aging mouse astrocytes, multiple brain areas |
| http://www.brainrnaseq.org/ | Barres | Zhang et al., 2014, 2016; Bennett et al., 2016; Clarke et al., 2018 | Glial cell specific in mouse and human; mouse microglia throughout development; aging mouse astrocytes, multiple brain areas |
| http://bioinf.nl:8080/GOAD2/ | Boddeke | Holtman et al., 2015 | Repository of multiple other published glia sequencing datasets |
| http://shiny.maths.usyd.edu.au/Ellis/MicrogliaPlots | Bradshaw | Aged human microglia | |
| http://astrocyternaseq.org/ | Khakh | Srinivasan et al., 2016; Chai et al., 2017 | Adult mouse brain regional differences in astrocytes |
| http://www.mousebrain.org/ | Linnarsson | Zeisel et al., 2018 | Single-cell analysis of many cell types from different brain regions and developmental stages of the mouse |
| http://www.dropviz.org/ | McCarroll | Saunders et al., 2018 | Single-cell analysis of many cell types from different mouse brain regions |
| https://astrocyte.rnaseq.sofroniewlab.neurobio.ucla.edu/ | Sofroniew | Anderson et al., 2016 | Mouse astrocyte reactivity in spinal cord injury and inflammation |
| http://www.microgliasinglecell.com/ | Stevens/McCarroll | Hammond et al., 2018 | Single cell microglia during age, by sex, and in demyelinating disease model |
Additional datasets for non-glial CNS cells are reviewed in Keil et al., 2018.