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. 2018 Dec 12;9:619. doi: 10.3389/fgene.2018.00619

Table 3.

Data of GIs, PAIS, and regions with DNA of bacteriophages curated in vitro from the reference organism Escherichia coli cft073.

GIsa GI name Locus tagb CDSc tRNAd GC% contente (%)
1 GI-CFT073-leuX c5386–c5371 15 leuX 48.15
2 PAI-CFT073-pheU c5216–c5143 61 pheU 47.57
3 GI-CFT073-selC c4581–c4491 70 selC 47.04
4 PAI-CFT073-pheV c3698–c3556 124 pheV 47.08
5 PAI-CFT073-metV c3410–c3385 25 metV 53.37
6 ϕ-CFT073-smpB c3206–c3143 49 49.32
7 GI-CFT073-cobU c2528–c2482 37 49.68
8 GI-CFT073-asnW c2475–c2449 26 asnW 53.12
9 PAI-CFT073-asnT c2436–c2418 15 asnT 58.27
10 PAI-CFT073-serU c2416–c2392 19 serU 37.65
11 PAI-CFT073-icdA c1601–c1518 74 50.23
12 ϕ-CFT073-ycfD c1507–c1481 14 49.78
13 ϕ-CFT073-potB c1475–c1400 51 50.97
14 PAI-CFT073-serX c1293–c1165 102 serX 48.76
15 ϕ-CFT073-b0847 c0979–c0932 42 50.45
16 PAI-CFT073-aspV c0368–c0253 83 aspV 47.43
a

(Genomic islands),

b

(Identifiers applied to each gene),

c

(Number of coding sequences),

d

(Transfer RNA),

e

(Percentage of guanine and cytosine content in the region). GI, Genomic islands; PAI, Pathogenic islands; ϕ, Islands containing predominantly bacteriophage DNA.