Table 2.
Top 20 most numerous PFamilies.
| Quantity | Symbol | PFamily Annotation | PFamily ID |
|---|---|---|---|
| 1243 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | PF00078.25 |
| 849 | Pkinase | Protein kinase domain | PF00069.23 |
| 823 | Pkinase_Tyr | Protein tyrosine kinase | PF07714.15 |
| 676 | rve | Integrase core domain | PF00665.24 |
| 641 | zf-C2H2 | Zinc finger, C2H2 type | PF00096.24 |
| 625 | zf-C2H2_4 | C2H2-type zinc finger | PF13894.4 |
| 512 | RRM_1 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | PF00076.20 |
| 490 | Ig_3 | Immunoglobulin domain | PF13927.4 |
| 478 | WD40 | WD domain, G-beta repeat | PF00400.30 |
| 473 | zf-H2C2_2 | Zinc-finger double domain | PF13465.4 |
| 472 | I-set | Immunoglobulin I-set domain | PF07679.14 |
| 462 | MFS_1 | Major Facilitator Superfamily | PF07690.14 |
| 455 | Ig_2 | Immunoglobulin domain | PF13895.4 |
| 449 | ig | Immunoglobulin domain | PF00047.23 |
| 426 | 7tm_6 | 7tm Odorant receptor | PF02949.18 |
| 420 | p450 | Cytochrome P450 | PF00067.20 |
| 400 | V-set | Immunoglobulin V-set domain | PF07686.15 |
| 345 | Transposase_1 | Transposase (partial DDE domain) | PF01359.16 |
| 334 | ANAPC4_WD40 | Anaphase-promoting complex subunit 4 WD40 domain | PF12894.5 |
| 327 | DDE_3 | DDE superfamily endonuclease | PF13358.4 |