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. 2018 Dec 3;10(12):684. doi: 10.3390/v10120684

Table 1.

Range of sequence identity matrix determined from nucleotides (nt) and deduced amino acids (aa) of each RNA segment of FMV-Cic and their homologues in other FMV isolates. n.a: not available. NCR: non-coding region. CR: coding region.

FMV-Cic 5′NCR
%
CR
%
3′NCR
%
Isolate (Accession Number)
nt nt aa nt Order of Isolates: JS1, SB1, Gr10, CAN01
RNA-1 84–100 88–97 93–96 87–99 (AB697826, AB697827, AM941711, HQ703343)
RNA-2 98–100 91–97 95–98 95–99 (AB697828, AB697829, FM864225, HQ703344)
RNA-3 93–99 96–98 98–99 90–96 (AB697843, AB697785, FM991954, HQ703345)
RNA-4 91–100 95–98 98–99 89–98 (AB697857, AB697865, FM992851, HQ703346)
RNA-5 84–100 84–97 82–96 84–95 (AB697871, AB697879, HE803826, n.a)
RNA-6 91–100 92–98 88–99 87–95 (AB697885, AB697893, HE803827, n.a)