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. 2018 Nov 26;140(50):17580–17590. doi: 10.1021/jacs.8b09609

Table 1. Kinetic Parameters for ScOMPDC-Catalyzed Decarboxylation of OMP and FOMPa.

  OMPb
FOMPc
 
ScOMPDC kcat/Km (M–1 s–1) ΔΔG (kcal/mol)d kcat/Km (M–1 s–1) ΔΔG (kcal/mol)d
graphic file with name ja-2018-096099_m010.jpg
e
wild-type 1.1 × 107   1.2 × 107   1.1
Q215A 2.6 × 105 2.2 2.0 × 106 1.1 7.7
Y217F 1.8 × 105 2.4 1.1 × 106 1.4 6.1
R235A 910 5.6 1.6 × 105 2.6 180
S154A 630 5.8 2.9 × 105 2.2 460
S154A/Q215A 380 6.1 7.7 × 104 3.0 200
S154A/Y217F 0.75 ± 0.01 9.8 520 ± 10 5.9 700
S154A/R235A 0.027 ± 0.004 11.7 20 ± 2 7.9 740
Q215A/Y217F 3.4 × 103 4.8 5.3 × 104 3.2 16
Q215A/R235A 14 8.0 7200 4.4 510
Y217F/R235A 4.1 8.8 820 5.7 200
S154A/Q215A/Y217F 0.28 ± 0.02 10.4 250 ± 10 6.4 890
S154A/Q215A/R235A 0.018 ± 0.001 12.0 10 ± 1 8.3 560
S154A/Y217F/R235A 0.0006 ± 0.0002f 14.0 0.44 ± 0.02 10.1  
Q215A/Y217F/R235A 0.037 11.6 28 7.7 760
S154A/Q215A/Y217F/R235A 0.0016 ± 0.0005f 13.4 1.1 ± 0.1 9.6  
a

Conditions: pH 7.1 (10 mM MOPS), 25 °C and I = 0.105 (NaCl).

b

The new values for this manuscript are in bold type. The other rate constants are from ref (11) or (15). The quoted uncertainty is the standard error from the least-squares fit of the kinetic data to the appropriate kinetic equation.

c

The new values for this manuscript are in bold type. The other rate constants are from ref (10).The quoted uncertainty in the original values is the average of two or more determinations of kcat/Km.

d

Calculated from the ratio of the values of kcat/Km for wild-type and mutant ScOMPDC-catalyzed decarboxylation of OMP or FOMP.

e

The ratio of the values of kcat/Km for OMPDC-catalyzed decarboxylation of OMP and FOMP.

f

No detectable activity toward decarboxylation of OMP: kcat/Km < 0.006 M–1 s–1. The rate constants were estimated from kcat/Km for mutant enzyme-catalyzed decarboxylation of FOMP (see text). The range of values is calculated from the estimated uncertainty of ±50% in Inline graphicfor OMPDC-catalyzed decarboxylation of OMP and FOMP.