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. 2018 Dec;4(6):a003079. doi: 10.1101/mcs.a003079

Table 1.

FLT3 fusions detected by RNA-seq

SampleID Left gene Left chromosome Left position Right gene Right chromosome Right position Number of reads spanning fusion Number of spanning mate pairs Number of mate pairs one end only spanning StrandInfo Left flanking sequence Right flanking sequence
13-00656 MYO18A 17 27423335 FLT3 13 28608319 8 4 6 rr ACCGTGCCACTTCCATCTC ATTATGGTAATGATACA AAGGAGGGGGGTGG TACAGGTGACCGGCTCCT CAGATAATGAGTACTTCT ACGTTGATTTCAGA
13-00656 MYO18A 17 27423778 FLT3 13 28608270 53 4 42 rr CTGGAGGGCCAGCAGG TCCGCAACCACGAACT GGAGAAGAAGCAGAGGAG AGAATATGAATATGATCTC AAATGGGAGTTTCCAAG AGAAAATTTAGAGT
15-00557 MYO18A 17 27423335 FLT3 13 28608319 11 2 10 rr ACCGTGCCACTTCCATCTC ATTATGGTAATGATACAAA GGAGGGGGGTGG TACAGGTGACCGGCTCCT CAGATAATGAGTACTTC TACGTTGATTTCAGA
15-00557 MYO18A 17 27423778 FLT3 13 28608270 20 2 17 rr CTGGAGGGCCAGCAGGTCC GCAACCACGAACTGGAG AAGAAGCAGAGGAG AGAATATGAATATGATCTC AAATGGGAGTTTCCAA GAGAAAATTTAGAGT
14-00126 ETV6 12 12037520 FLT3 13 28608350 133 8 85 fr TCCGGATAGTGGATCCCAACG GACTGGCTCGACTGTGGGG AAACCATAAG CAATTTAGGTATGAAAGC CAGCTACAGATGGTAC AGGTGACCGGCTCCTC