Table 1.
FLT3 fusions detected by RNA-seq
SampleID | Left gene | Left chromosome | Left position | Right gene | Right chromosome | Right position | Number of reads spanning fusion | Number of spanning mate pairs | Number of mate pairs one end only spanning | StrandInfo | Left flanking sequence | Right flanking sequence |
---|---|---|---|---|---|---|---|---|---|---|---|---|
13-00656 | MYO18A | 17 | 27423335 | FLT3 | 13 | 28608319 | 8 | 4 | 6 | rr | ACCGTGCCACTTCCATCTC ATTATGGTAATGATACA AAGGAGGGGGGTGG | TACAGGTGACCGGCTCCT CAGATAATGAGTACTTCT ACGTTGATTTCAGA |
13-00656 | MYO18A | 17 | 27423778 | FLT3 | 13 | 28608270 | 53 | 4 | 42 | rr | CTGGAGGGCCAGCAGG TCCGCAACCACGAACT GGAGAAGAAGCAGAGGAG | AGAATATGAATATGATCTC AAATGGGAGTTTCCAAG AGAAAATTTAGAGT |
15-00557 | MYO18A | 17 | 27423335 | FLT3 | 13 | 28608319 | 11 | 2 | 10 | rr | ACCGTGCCACTTCCATCTC ATTATGGTAATGATACAAA GGAGGGGGGTGG | TACAGGTGACCGGCTCCT CAGATAATGAGTACTTC TACGTTGATTTCAGA |
15-00557 | MYO18A | 17 | 27423778 | FLT3 | 13 | 28608270 | 20 | 2 | 17 | rr | CTGGAGGGCCAGCAGGTCC GCAACCACGAACTGGAG AAGAAGCAGAGGAG | AGAATATGAATATGATCTC AAATGGGAGTTTCCAA GAGAAAATTTAGAGT |
14-00126 | ETV6 | 12 | 12037520 | FLT3 | 13 | 28608350 | 133 | 8 | 85 | fr | TCCGGATAGTGGATCCCAACG GACTGGCTCGACTGTGGGG AAACCATAAG | CAATTTAGGTATGAAAGC CAGCTACAGATGGTAC AGGTGACCGGCTCCTC |