cwt	Hundredweight
RPKM	Reads per kilobase million
hpi	Hours post inoculation
FDR	False discovery rate
GTP	Guanosine triphosphate
PHE	Phenylalanine
NADP	Nicotinamide adenine dinucleotide phosphate
KEGG	Kyoto encyclopedia of genes and genomes
KO	KEGG ontology
PR	Pathogenesis related
PR1	Pathogenesis related protein 1
ERF1	Eukaryotic release factor 1
EBF1/2	Early B cell factor ½
PP2C	Protein phosphatase 2C
ETR/ERS	Ethylene receptors
FLS2	Flagellin sensing 2
CAT1	Cationic amino acid transporter 1
PYR/PYL	ABA receptors
ChiB	Chitinase B
RTE1	Reversion to ethylene sensitivity
ACS6	1-aminocyclopropane-1-carboxylate synthase 6
OX1	Oxidase 1
JAZ	Jasmonate zim domain protein
NB-	Nucleotide binding-
LRRs	Leucine rich repeats
ITAG	International tomato annotation group