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. 2018 Dec 14;19(12):4039. doi: 10.3390/ijms19124039

Table 1.

The features of chloroplast genomes of seven Lonicera species.

Species L. ferdinandi L. hispida L. nervosa L. fragrantissima var. lancifolia L. stephanocarpa L. tragophylla L. japonica
No. of mapped reads 180,643 159,034 158,808
Average coverage 149.1 419.2 198.4
Total sequence length 154,513 154,553 154,862 154,732 155,056 155,545 155,078
Large single copy (LSC) 88,554 88,631 88,728 88,504 88,912 89,299 88,858
Inverted repeat (IR) region 23,685 23,646 23,791 23,731 23,690 23,759 23,774
Small single copy (SSC) 18,589 18,630 18,552 18,766 18,763 18,728 18,672
GC content (%) 38.4 38.3 38.6 38.3 38.3 38.5 38.6
GC content in LSC (%) 36.9 36.8 36.9 36.8 36.8 37.0 37.1
GC content in IR (%) 43.4 43.4 43.5 43.3 43.4 43.5 43.5
GC content in SSC (%) 33.2 32.9 33.1 32.9 32.8 33.1 33.4
No. of total genes 128 128 128 128 128 128 128
Protein-coding genes 82 (4) 82 (4) 82 (4) 82 (4) 82 (4) 82 (4) 82 (4)
tRNAs genes 37 (7) 37 (7) 37 (7) 37 (7) 37 (7) 37 (7) 37 (7)
rRNAs genes 8 (4) 8 (4) 8 (4) 8 (4) 8 (4) 8 (4) 8 (4)
Genes with introns 20 (4) 20 (4) 20 (4) 20 (4) 20 (4) 20 (4) 20 (4)

Note: Numbers in brackets indicate genes duplicated in the IR regions.