TABLE 1.
Overall genetic information of 73 T. pallium DNA-positive samples from patients with a known transmission route
| Type | Typing status | arp type | tpr type | tp0548 type | No. of samples | Genetic groupa | 23S rRNA genes (total no. of samples [no. from HW, HM, and MSM])b
|
Transmission route (no. of samples) |
||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Resistant | Sensitive | NAc | HW | HM | MSM | |||||||
| 7o/c | Complete | 7 | o | c | 1 | Nichols-like | 1 | 1 | ||||
| 10b/a | Complete | 10 | b | a | 1 | Nichols-like | 1 | 1 | ||||
| 10o/c | Complete | 10 | o | c | 1 | Nichols-like | 1 | 1 | ||||
| 12a/c | Complete | 12 | a | c | 1 | Nichols-like | 1 | 1 | ||||
| 14a/o | Complete | 14 | a | o | 1 | SS14-like | 1 | 1 | ||||
| 14b/c | Complete | 14 | b | c | 1 | Nichols-like | 1 | 1 | ||||
| 14b/d | Complete | 14 | b | d | 1 | Nichols-like | 1 | 1 | ||||
| 14d/c | Complete | 14 | d | c | 1 | Nichols-like | 1 | 1 | ||||
| 14d/f | Complete | 14 | d | f | 38 | SS14-like | 34 (6, 24, 4) | 3 (0, 0, 3) | 1 (1, 0, 0) | 7 | 24 | 7 |
| 14d/g | Complete | 14 | d | g | 3 | SS14-like | 3 (0, 0, 3) | 3 | ||||
| 14e/f | Complete | 14 | e | f | 1 | SS14-like | 1 | 1 | ||||
| 14f/f | Complete | 14 | f | f | 1 | SS14-like | 1 | 1 | ||||
| 14j/f | Complete | 14 | j | f | 2 | SS14-like | 1 (0, 1, 0) | 1 (0, 1, 0) | 2 | |||
| 14k/f | Complete | 14 | k | f | 1 | SS14-like | 1 | 1 | ||||
| 14l/f | Complete | 14 | l | f | 2 | SS14-like | 2 (0, 2, 0) | 2 | ||||
| 14p/f | Complete | 14 | p | f | 2 | SS14-like | 1 (1, 0, 0) | 1 (0, 1, 0) | 1 | 1 | ||
| 14/NA/f | Partial | 14 | NA | f | 1 | SS14-like | 1 | 1 | ||||
| 14/NA/NA | Partial | 14 | NA | NA | 1 | unknown | 1 | 1 | ||||
| 14d/NA | Partial | 14 | d | NA | 1 | unknown | 1 | 1 | ||||
| NA/d/f | Partial | NA | d | f | 2 | SS14-like | 2 (1, 1, 0) | 1 | 1 | |||
| NA/e/f | Partial | NA | e | f | 1 | SS14-like | 1 | 1 | ||||
| NA/NA/c | Partial | NA | NA | c | 2 | Nichols-like | 1 (0, 0, 1) | 1 (1, 0, 0) | 1 | 1 | ||
| NA/NA/f | Partial | NA | NA | f | 2 | SS14-like | 1 (0, 1, 0) | 1 (0, 1, 0) | 2 | |||
| NA/NA/g | Partial | NA | NA | g | 1 | SS14-like | 1 | 1 | ||||
| NA/NA/NA | Failed | NA | NA | NA | 4 | unknown | 4 (1, 2, 1) | 1 | 2 | 1 | ||
a
Determined as described in reference 8.
b
HW, heterosexual women; HM, heterosexual men; MSM, men who have sex with men.
c
NA, data not available.