Table 3.
Functional categories for up- and down-regulated genes in the DNB module of rice flower development
| Gene name | Fold change | Transition state | Description |
|---|---|---|---|
| Os04g0417400 | 6.80 | up-regulated | U box domain containing protein. |
| LOC4340069 | 1.93 | up-regulated | DNA-binding protein (Homeodomain-leucine zipper transcription factor) |
| LOC4346839 | 1.82 | up-regulated | Disease resistance protein family protein.disease resistance protein RGA5-like |
| LOC4341399 | 1.74 | up-regulated | pollen-specific leucine-rich repeat extensin-like protein 1 |
| LOC4326659 | 1.59 | up-regulated | Cytochrome P450 monooxygenase CYP72A5 |
| LOC4338660 | 1.56 | up-regulated | UDP-sulfoquinovose synthase, chloroplast precursor (Sulfolipid biosynthesis protein) |
| LOC4345661 | 1.43 | up-regulated | Myb-like protein (transcription factor CSA-like) |
| LOC4324767 | 1.36 | up-regulated | TPR-like domain containing protein. |
| LOC4339280 | 1.36 | up-regulated | Cyclin-like F-box domain containing protein (F-box protein At5g46170) |
| LOC4332901 | 1.32 | up-regulated | Sugar transporter-like protein |
| LOC4324342 | 1.32 | up-regulated | Plant lipid transfer/seed storage/trypsin-alpha amylase inhibitor domain containing protein |
| LOC4351030 | 1.32 | up-regulated | Hypothetical protein |
| LOC4341957 | 1.31 | up-regulated | Macrophage migration inhibitory factor family protein |
| LOC112936214 | 1.32 | up-regulated | eukaryotic cysteine peptidase active site family protein (putative F-box protein At5g15660) |
| LOC4324302 | 1.37 | up-regulated | Myb-related protein 5 (transcription factor MYB59) |
| LOC4338652 | 1.31 | up-regulated | ABC transporter G family member 23 |
| LOC4338416 | 0.79 | down-regulated | ABC-1 domain containing protein (protein ACTIVITY OF BC1 COMPLEX KINASE 3, chloroplastic) |
| LOC4329899 | 0.71 | down-regulated | Galactosyltransferase associated protein kinase p58/GTA (Cell division cycle 2-like 2) |
| LOC4348579 | 0.78 | down-regulated | Protein kinase APK1B (EC 2.7.1.-) |
| LOC4338491 | 0.76 | down-regulated | Ribulose bisphosphate carboxylase |
| LOC4350151 | 0.76 | down-regulated | probable sucrose-phosphate synthase 5 |
| LOC4349274 | 0.75 | down-regulated | Zn-finger, RING domain containing protein (NEP1-interacting protein 1) |
| LOC4335569 | 0.69 | down-regulated | Helicase-like protein |
| LOC4324503 | 0.57 | down-regulated | Ribosomal protein S8 family protein. |
| LOC4335392 | 0.49 | down-regulated | Allergen V5/Tpx-1 related family protein (pathogenesis-related protein 1) |
| LOC9272032 | 0.35 | down-regulated | probable LRR receptor-like serine/ threonine-protein kinase At1g51810 |