Table 1.
ChIP-seq datasets used in MethMotif database
| Cell ID | Organism | Cell type/tissue | Number of ChIP-seq experiments | Source | Download date |
|---|---|---|---|---|---|
| HeLa-S3 | Human | Cervix | 57 | ENCODE | 20 August 2017 |
| HEK293 | Human | Kidney | 199 | ENCODE | 12 March 2018 |
| IMR-90 | Human | Lung | 15 | ENCODE | 26 March 2018 |
| SK-N-SH | Human | Brain | 30 | ENCODE | 26 March 2018 |
| A549 | Human | Lung | 42 | ENCODE | 26 March 2018 |
| K562 | Human | Blood | 279 | ENCODE | 2 April 2018 |
| HepG2 | Human | Liver | 138 | 137-ENCODE, 1-GEO | 7 April 2018 |
| GM12878 | Human | Blood | 143 | ENCODE | 12 April 2018 |
| MCF-7 | Human | Breast | 99 | ENCODE | 13 April 2018 |
| H1-hESC | Human | Stem cell | 65 | ENCODE | 16 April 2018 |
| HCT116 | Human | Colorectum | 22 | ENCODE | 16 April 2018 |