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. 2018 Oct 13;47(Database issue):D361–D366. doi: 10.1093/nar/gky916

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© The Author(s) 2018. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 2. — Running Kinformation on KinaMetrix. An example output after running Kinformation with PDB ID: 1A06 as input. 1A06 corresponds to the structure of Calmodulin-Dependent Protein Kinase. (1) This figure displays the predicted kinase conformation of the user-uploaded structure as well as a prototypical example of the conformation. (2) This table shows the probabilities of all conformational states for the uploaded structure. (3) This plot shows the relative position of the uploaded structure (red dot) in the conformational space described by the αC-helix and DFG motifs in comparison to all other kinase structures available on KinaMetrix. (4) This section allows the user to download the data generated from running the Kinformation classifier. (5) This table shows the structural similarity of the uploaded kinase structure to all other kinase structures using the Euclidean distance of their geometric descriptors.