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Sequence ontology terms used to annotate lncRNA subclasses
| Classification | Gene level SO term | Transcript level SO term |
|---|---|---|
| intergenic | lincRNA_gene (SO:0001641) | lincRNA (SO:0001463) |
| antisense | antisense_lncRNA_gene (SO:0002182) | antisense_lncRNA (SO:0001904) |
| intronic | sense_intronic_ncRNA_gene (SO:0002184) | sense_intronic_ncRNA (SO:0002131) |
| sense-overlapping | sense_overlap_ncRNA_gene (SO:0002183) | sense_overlap_ncRNA (SO:0002132) |
| bidirectional | bidirectional_promoter_lncRNA (SO:0002185) | NA |
