Figure 1.
The updated web interface of ICEberg 2.0 using the SXT(MO10) in Vibrio cholerae O139 MO10 as an example. (A) The browse modules of ICEberg on the home page, consisting of three sections (ICEs, IMEs and CIMEs). (B) An overview of the feature of SXT(MO10) with the newly added putative oriT region (oriT coordinates, the corresponding link of most related oriT in oriTDB and the detailed sequences) and relaxase gene (coordinates, locus tag and MOB family). (C) Detailed information on the mobile interactions between ICEs and IMEs or CIMEs in both graph and table format. (D) A graphical display of ICE genetic modules was constructed using a local Perl script. AR: acquired antibiotic resistance genes; T4SS, type IV secretion system.
