Table 2. Down-regulated DEPs related to root growth of rapeseed plants after 3 and 14 d of high-N and low-N treatment.
| Protein Identifier | Arabidopsis Homolog | Ratio 3 d | Ratio 14 d | Abbreviation in Arabidopsis | Protein | No. of Unique Peptides | No. of Peptides | No. of Peptide Spectrum Matches |
|---|---|---|---|---|---|---|---|---|
| Cell wall organization or biogenesis | ||||||||
| BnaA03g47620D | NP_194312.1 | 0.440 | – | XTH14 | Xyloglucan endotransglucosylase/hydrolase14 | 1 | 3 | 3 |
| BnaA10g05530D | NP_199783.1 | 0.615 | – | GH9A1 | Endoglucanase25 | 2 | 6 | 8 |
| BnaA05g05070D | NP_182099.1 | 0.580 | – | AT2G45750 | Putative methyltransferase PMT16 | 5 | 5 | 10 |
| BnaA03g01580D | NP_196115.1 | 0.605 | – | AT5G04960 | Putative pectinesterase/pectinesterase inhibitor46 | 3 | 4 | 10 |
| BnaC09g11880D | NP_176598.1 | – | 0.560 | DIR5 | Dirigent protein5 | 4 | 5 | 21 |
| BnaC08g46340D | NP_563732.1 | 0.595 | – | AT1G05240 | Peroxidase1/2 | 3 | 6 | 10 |
| BnaAnng05140D | NP_201541.1 | 0.538 | – | RHS19 | Peroxidase73 | 2 | 7 | 29 |
| BnaA03g47730D | NP_567738.1 | 0.612 | – | AT4G26010 | Peroxidase44 | 7 | 9 | 29 |
| BnaA03g47720D | NP_567738.1 | 0.606 | – | AT4G26010 | Peroxidase44 | 6 | 15 | 55 |
| BnaCnng11080D | NP_174372.1 | 0.571 | – | AT1G30870 | Peroxidase7 | 1 | 3 | 3 |
| BnaA06g23250D | NP_201215.1 | 0.605 | – | AT5G64100 | Peroxidase69 | 6 | 10 | 53 |
| BnaA09g25570D | NP_174372.1 | 0.336 | – | AT1G30870 | Peroxidase7 | 1 | 3 | 4 |
| BnaA03g06740D | NP_197284.1 | 0.490 | – | AT5G17820 | Peroxidase57 | 3 | 9 | 20 |
| BnaC09g07300D | NP_201541.1 | 0.428 | – | RHS19 | Peroxidase73 | 10 | 16 | 45 |
| BnaAnng10890D | NP_179488.1 | – | 0.589 | AT2G18980 | Peroxidase16 | 2 | 13 | 59 |
| BnaA09g07380D | NP_201541.1 | – | 0.653 | RHS19 | Peroxidase73 | 2 | 16 | 47 |
| BnaA09g53760D | NP_192617.1 | – | 0.646 | Prx37 | Peroxidase37 | 1 | 16 | 61 |
| BnaC08g46330D | NP_563732.1 | – | 0.626 | AT1G05240 | Peroxidase1/2 | 6 | 15 | 26 |
| BnaA02g34060D | NP_201215.1 | – | 0.293 | AT5G64100 | Peroxidase69 | 1 | 12 | 52 |
| BnaCnng51060D | NP_201217.1 | – | 0.585 | AT5G64120 | Peroxidase71 | 10 | 10 | 17 |
| BnaA05g34020D | NP_186768.1 | – | 0.611 | AT3G01190 | Peroxidase27 | 5 | 16 | 49 |
| BnaA06g23250D | NP_201215.1 | – | 0.459 | AT5G64100 | Peroxidase69 | 8 | 13 | 55 |
| BnaA10g03270D | NP_563732.1 | – | 0.613 | AT1G05240 | Peroxidase1/2 | 5 | 8 | 13 |
| BnaA03g28350D | NP_187017.1 | – | 0.457 | AT3G03670 | Peroxidase | 5 | 5 | 8 |
| BnaC09g25420D | NP_192617.1 | – | 0.657 | Prx37 | Peroxidase37 | 1 | 16 | 61 |
| BnaC01g04790D | NP_567919.1 | – | 0.626 | AT4G33420 | Peroxidase | 5 | 5 | 7 |
| BnaA03g17000D | NP_181250.1 | 0.617 | 0.654 | AT2G37130 | Peroxidase | 4 | 13 | 37 |
| BnaC02g07500D | NP_197284.1 | 0.565 | 0.634 | AT5G17820 | Peroxidase57 | 4 | 14 | 56 |
| Cell cytoskeleton organization | ||||||||
| BnaCnng08860D | NP_171680.1 | 0.407 | – | ADF11 | Actin-depolymerizing factor11 | 2 | 4 | 9 |
| Auxin related | ||||||||
| BnaC01g04630D | NP_199960.1 | – | 0.454 | AT5G51470 | Auxin-responsive GH3 family protein | 2 | 2 | 3 |
| Root hair related | ||||||||
| BnaA02g20520D | NP_192136.1 | 0.294 | – | RHS13 | Root hair specific13 | 3 | 3 | 8 |
| BnaA06g39800D | NP_178467.1 | 0.555 | – | MRH6 | Morphogenesis of root hair6 | 1 | 2 | 3 |
| BnaC06g18560D | NP_175895.1 | 0.318 | – | PRP1 | Pro-rich protein1 | 1 | 3 | 4 |