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. 2018 Nov 2;179(1):24–37. doi: 10.1104/pp.18.00974

Table 1. List of 35 significant TASs affecting 38 trait associations.

Trait SNP −log10(P value) Estimate Effect Standardized Effect Size RMIP
Area.front S1_3176715 9.80 −5.75 0.27 0.47
Area.front S4_12278584a 6.56 −4.16 0.20 0.13
Area.front S4_60591319 6.88 −5.38 0.25 0.19
Area.front S10_1793055 6.58 4.96 0.23 0.22
Area.side S3_3201555b 9.47 6.55 0.51 0.16
Area.side S3_58994806a 8.07 3.53 0.28 0.12
Area.side S5_17518239 6.74 4.07 0.32 0.44
Area.side S6_49755954 7.91 −3.28 0.26 0.30
Panicle length S1_8065027a,c 6.69 0.98 0.22 0.07
Panicle length S2_63553713a,c 15.21 3.36 0.74 0.75
Panicle length S3_58920501a 6.92 0.90 0.20 0.05
Panicle length S8_14556347c 7.28 −1.67 0.37 0.40
Panicle length S10_50809289 10.68 1.31 0.29 0.19
Panicle length S10_54184063 6.88 −0.84 0.18 0.17
Solidity.front S2_10933862b 15.07 −0.07 0.71 0.82
Solidity.front S2_70599334 10.56 −0.03 0.32 0.09
Solidity.front S2_76284762a 9.48 0.04 0.41 0.05
Solidity.front S3_56132328 6.59 0.02 0.16 0.27
Solidity.front S4_56171463 15.34 −0.03 0.36 0.45
Solidity.front S6_60219786a 7.39 0.02 0.26 0.07
Solidity.front S8_6056282b 7.40 −0.03 0.36 0.13
Solidity.front S10_1149373 6.62 −0.02 0.24 0.05
Solidity.side S1_19664643a 7.20 −0.04 0.59 0.31
Solidity.side S2_10933862b 10.13 −0.05 0.66 0.81
Solidity.side S7_54381792 9.13 0.04 0.56 0.31
Solidity.side S8_6056282b 7.57 −0.03 0.41 0.38
Volume S3_3201555b 9.34 33.33 0.53 0.45
Width.front S2_68297155 14.17 0.53 0.38 0.72
Width.front S3_3724913 8.87 0.48 0.34 0.48
Width.front S3_57037006 10.99 0.71 0.50 0.69
Width.front S4_65197133 7.61 0.53 0.38 0.10
Width.front S5_11264509 7.98 0.58 0.41 0.15
Width.front S6_60559938 6.62 0.42 0.30 0.17
Width.front S8_26248649 8.04 0.58 0.42 0.18
Width.front S8_45726712 9.35 0.44 0.31 0.12
Width.front S9_3027904 7.81 0.62 0.44 0.24
Width.side S3_2724080a 9.57 0.27 0.43 0.19
Width.side S10_60236042a 6.82 0.15 0.23 0.08
a

Have the candidate gene located within 350 kb on either side of the TAS (Table 2).

b

Pleiotropic TASs in GWAS of the full set.

c

TASs that overlap with previously reported QTLs or GWAS intervals (Supplemental Table S1).