TABLE 2.
List of primers used in this study
Purpose and name | Sequence (3′–5′) |
---|---|
CgEPA3 gene cloning | |
pGREG_CgEPA3_I_FW | TGCTATTAGGTCAACCTTGTAACAGCTGCCATAGCTATTCGAACTATAGCTTAAG |
pGREG_CgEPA3_I_Rev | CAGTTGCCACGATGACTAGTCAGCTGGAGCTCAGTACATTAATCAATACAGTGCG |
pGREG_CgEPA3_II_FW | GTCATCGTGGCAACTGTGATTTTCTTTCTAGATTCCTACT |
pGREG_CgEPA3_II_Rev | CGTGAAAAAAAGACTAAATTCAGCTGGAGCTCAGTACATTAATCAATACAGTGCG |
pGREG576 GAL-to-PDCI promotor replacement | |
pGREG_PDCI_ FW | TTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCAGCATTTTTATACACGTTTTAC |
pGREG_PDCI_Rev | GAAAAGTTCTTCTCCTTTACTCATACTAGTGCGGCTGTTAATGTTTTTTGGCAATTG |
CgEPA1, CgEPA3, CgEPA9, CgEPA10, AWP12 and AWP13 gene disruption | |
ΔCgEPA1_FW | GCACTAGTCGCCGGACAAAATCAAACCAATTAACGTTTCTGATTTAGAGTTCTTACTTCTTTTTCGAAAC |
ΔCgEPA1_Rev | GGTCGGAGTGCTACATTTTGGTCCTTTATATTATTGAAGGTATCAAATCGTAACATTTTCGACACCACCG |
ΔCgEPA3_FW | GCACTAGTCGCCGGTAACTAAAAAAAAGAAAACATTGAAAAAGACTAGTTAAATTAAGCTAATACTACCA |
ΔCgEPA3_Rev | GGTCGGAGTGCTACATTAAGACAAGGGAATTAAAGATAATACTATAACAAAGAGAAATAAGTAACTAATT |
ΔCgEPA3_SAT1_FW | ATCATTCCTGGTTTGACAATGGAACTTTACTCTTACCCTATTGTCAGTGGTACTCCTCCCATGGACGGTGGTATGTTTTA |
ΔCgEPA3_SAT1_Rev | GCTTCGAAGCTTTACCCTTGTACTCTGAAAAATTAGGGATATTAAAGACAGAACTAGAGGTTAGGCGTCATCCTGTGCTC |
ΔCgEPA9_FW | TCACTAAGTGGATGAAATGCAGAAAGAATACAATTTAACCCTCTTCAATGCGATCCGGCGGCCGCTGATCACG |
ΔCgEPA9_Rev | CAACTGCCAAAGGGTTCACAAGTTGAATACCAGGCCAACCATCATCAGTGGCAGGGCGACATCGTGAGGCTGG |
ΔCgEPA10_FW | GCACTAGTCGCCGGGCTAATACCTGATCGTAGACTATATTACTTCATAAAACTTTTGTTACCTACCCGTA |
ΔCgEPA10_Rev | GGGAAAGAAAAATCAACCACATTGGCAAAACGTAGACATCTTGTCAACTGCCAAAGCATCGTGAGGCTGG |
ΔCgAWP12_FW | TACTTAAAATTTCCTTTCTCAATCAACAAAAATATCCATTAACTGAAAAAGAATACGGCGGCCGCTGATCACG |
ΔCgAWP12_Rev | TATCAATGTTCATATTGAAAGAAACAGCCTATCTAAAAATCATGGCTGGACGAACGCGACATCGTGAGGCTGG |
ΔCgAWP13_FW | ATTACGTGACAAAAGACAGATAAAGGAATTCTAAATATCCATCTACAAGACCATTCGGCGGCCGCTGATCACG |
ΔCgAWP13_Rev | CCTATCTAAAAATCATGGCTGGACGAACGTTTGTATTACTGTACATGTTGGGCATTCGACATCGTGAGGCTGG |
ΔCgEPA1_conf_FW | TAAATAAGTTTTTATCTCGACC |
ΔCgEPA1_conf_Rev | GGTTTTCATTGACCGAAG |
ΔCgEPA3_conf_FW | CGGAACTTCATTGGTATG |
ΔCgEPA3_conf_Rev | CATACCAATGAAGTTCCG |
ΔCgEPA3_SAT1_conf_FW | CCCAGAACCCATTTGGTTATCC |
ΔCgEPA3_SAT1_conf_Rev | GCCCAGATAACAACACAAGTCC |
ΔCgEPA9_conf_FW | CTTTTGGTATCTGACTCTGTTAT |
ΔCgEPA9_conf_Rev | GGTCCCAAGAGATTTTACC |
ΔCgEPA10_conf_FW | TGTCTCAGTCTATGGCTTTC |
ΔCgEPA10_conf_Rev | CTCAAGTGTCTCCCAACA |
ΔCgAWP12_conf_FW | GCCTGTGGATATTGCTACT |
ΔCgAWP12_conf_Rev | GTCACTGATTGAAAGTTCTCG |
ΔCgAWP13_conf_FW | GTATATTTTCAAGTGCTGCAT |
ΔCgAWP13_conf_Rev | CTACCGTGGTTTCACTTG |
RT-PCR experiments | |
CgEPA1_FW | TTGATTGCTGCAGAAGGGATT |
CgEPA1_Rev | ATGGCGTAGGCTTGATAATTTCC |
CgEPA3_FW | GTTCCTGTCACCAGCACCATATACTA |
CgEPA3_Rev | CCTTGGCAACTAGGTGTTTGG |
CgCDR1_FW | GCTTGCCCGCACATTGA |
CgCDR1_Rev | CCTCAGGCAGAGTGTGTTCTTTC |
CgACT1_FW | AGAGCCGTCTTCCCTTCCAT |
CgACT1_Rev | TTGACCCATACCGACCATGA |