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. 2018 Nov 2;211(1):235–262. doi: 10.1534/genetics.118.301687

Table 1. Power/type-I error of various implementations of the TX statistic.

Input Proportion-of-lineages estimator Waiting-time estimator Lineages-remaining estimator
χ2 distribution Permutation distribution χ2 distribution Permutation distribution χ2 distribution Permutation distribution
Neutral True trees 0.053 0.054 0.030 0.060 0.061 0.064
RENT+ 0.17 0.08 0.31 0.04 0.11 0.09
Selection, 0.02 coalescent units ago–now True trees 1 1 0.033 0.060 0.194 0.222
RENT+ 0.87 0.05 0.15
Selection, 0.04–0.02 coalescent units ago True trees 0.969 0.954 0.035 0.065 0.058 0.084
RENT+ 0.37 0.08 0.02

Power/type-I error (at the 0.05 level) of various implementations of the TX statistic in the simulations shown in Figure 4 and Figure 5, with 200 chromosomes sampled in the present. Power is not shown for methods with type-I error rates 0.1. TX was computed using allele-frequency estimates 0,0.01,0.02,,0.1 coalescent units before the present.