Table 2.
1-Mb genomic windows that accounted for greater than 1% genetic variance for response to vaccination traits
| Virus | Traita | Chr_Mbb | Starting SNP | Ending SNP | # of SNP | Genetic Variance (%) | PPIc |
|---|---|---|---|---|---|---|---|
| BVDV1 | Initial Vaccination Titer | 2_24 | rs137131604 | rs109222292 | 220 | 1.64 | 0.57 |
| 18_9 | rs43715906 | rs29024678 | 400 | 1.01 | 0.65 | ||
| Overall Vaccination Response | 4_12 | rs133210106 | rs109951163 | 172 | 1.93 | 0.61 | |
| 29_32 | rs43727482 | rs137609870 | 253 | 1.15 | 0.51 | ||
| BVDV2 | Booster Vaccination Response | 27_16 | rs134611614 | rs43207573 | 300 | 1.03 | 0.54 |
| BRSV | Overall Vaccination Response | 1_144 | rs109534947 | rs42965155 | 296 | 1.03 | 0.49 |
aAll trait titers measured in log2 transformations from serum neutralization dilutions
b1-Mb window defined by chromosome and mega base position. UMD3.1 build of Bos taurus genome
cPosterior probability of inclusion (inclusion rate in BayesB analysis)