Table 2. Number of genes enriched and depleted in individual MB classes and subtypes. Genes identified by limma/voom (q-value < 0.05, |fold change| > 2x).
GROUPTYPE | GROUP | ENRICHED | DEPLETED |
---|---|---|---|
class | γ | 47 | 22 |
class | α′/β′ | 78 | 54 |
class | α/β | 77 | 63 |
subtype | γd | 3 | 2 |
subtype | γm+d | 3 | 1 |
subtype | α′/β′ap+m | 6 | 2 |
subtype | α′/β′m | 6 | 0 |
subtype | α/βp | 21 | 11 |
subtype | α/βs | 0 | 0 |
subtype | α/βc | 1 | 1 |