Table 3.

Chromosomal coordinates of rNMPs sites calculated by emRiboSeqProcessor that are located beyond the ends of the chromosomes

Chromosome	Start position	End position	Strand
1. Chromosome I	–1	0	–
2. Chromosome II	813184	813185	+

Coordinates were calculated based on (1.) one read that aligned to the 5′-most end of the forward strand of chromosome I (zero-based start/end positions should be 0/1) and (2.) another read that aligned to the 5′-most end of the reverse strand of chromosome II (zero-based start/end positions should be 813183/813184) of the Saccharomyces cerevisiae genome. To prevent errors in downstream analyses, emRiboSeqProcessor should have screened the calculated coordinates for biological relevance prior to saving them to the output BED file.