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. Author manuscript; available in PMC: 2020 Jan 1.
Published in final edited form as: FEBS J. 2018 Dec 22;286(1):82–109. doi: 10.1111/febs.14728

Table 10:

Locations of shared differentially bound H3K4me3 and differentially expressed mRNA

Increased Differentially Bound H3K4me3 Increased Differential mRNA Transcripts Comparison Group Gene H3K4me3 Peak Location Differentially Bound H3K4me3 p-value Differentially Expressed mRNA Transcript p-value
Healthya Uc CUe STXBP5-AS1 Promoter 2.58E-21 4E-4
Healthya Ld CLf ITGB3BP Promoter 3.07E-31 0.0019
TPGS1 Promoter 2.28E-29 6.5E-4
TACSTD2 Inside gene 1.06E-26 0.0016
GPSM2 Inside gene 2.19E-24 0.0013
LRR1 Promoter 8.4E-24 0.0025
RFNG Promoter 1.6E-23 0.0035
PIGZ Upstream 2.59E-23 2.5E-4
PGM2 Inside gene 2.76E-23 0.001
RGS9BP Promoter 2.87E-23 2E-4
FRS3 Upstream 3.24E-19 2E-4
NAA50 Inside gene 6.06E-19 0.0034
ZNF747 Promoter 2.15E-18 5.2E-4
IMPACT Inside gene 3.95E-18 0.0034
FKBP9 Promoter 2.21E-17 4.3E-5
PRRG4 Promoter 4.34E-17 1.3E-5
NDC1 Inside gene 4.63E-17 0.0028
PKIB Upstream 6.33E-17 1.2E-5
RALGAPA2 Promoter 8.71E-16 9.9E-5
B4GALT6 Upstream 6.67E-15 0.0041
SNX33 Promoter 6.68E-15 2.3E-4
KCTD3 Promoter 4.24E-13 2.5E-4
TTC12 Promoter 5.72E-12 3E-5
MAD2L1 Promoter 1.63E-11 7.2E-5
Choriob CUe Uc RASEF Downstream 1.1E-6 1.4E-4
LRRC70 Downstream 9.4E-6 5.7E-4
KLHDC9 Upstream 1.3E-4 8.7E-5
CFAP46 Inside gene 9E-4 1.6E-4
KEL Upstream 0.0017 1.6E-4
SARDH Upstream 0.0025 3.7E-5
ZNF608 Downstream 0.0026 3.6E-5
CLEC1B Upstream 0.0045 1.7E-4
MAP9 Upstream 0.015 2.6E-4
Choriob CLf Ld LRGUK Inside gene 4.1E-9 0.0017
DNAJC5B Upstream 3.6E-8 4E-4
HIBCH Upstream 2E-6 0.0042
FOXP3 Inside gene 3.1E-6 5.5E-4
ALAS2 Inside gene 2.7E-5 0.002
MECOM Inside gene 2.8E-5 6.9E-4
ARV1 Inside gene 3.9E-5 0.0014
KLHDC9 Upstream 1.3E-4 3.9E-5
MRPL45P2 Downstream 2E-4 1.8E-4
TRUB1 Upstream 2.2E-4 7E-5
CACNA2D2 Inside gene 2.3E-4 5.3E-4
EXTL2 Downstream 4.8E-4 0.0031
LGR5 Upstream 8.9E-4 0.0014
NMNAT2 Inside gene 0.0011 0.0022
MIR652 Downstream 0.0013 8.7E-4
DMBX1 Upstream 0.0025 1.3E-4
DAPK2 Inside gene 0.0033 5.5E-5
RASGRF1 Inside gene 0.0035 4.1E-5
CEP44 Upstream 0.0036 0.0015
CETN3 Downstream 0.0043 0.0023
KCNIP4 Inside gene 0.005 1.4E-4
CMKLR1 Upstream 0.0055 2.4E-5
MDGA1 Promoter 0.01 0.0023
TTYH1 Upstream 0.01 0.0022
DYNC2H1 Inside gene 0.014 6.8E-8
AXIN2 Downstream 0.014 2.9E-4
ZNF385C Upstream 0.022 0.0011
NCAPH Downstream 0.024 1E-5
DET1 Upstream 0.035 0.0024
VIL1 Upstream 0.035 0.0038
ACADSB Downstream 0.036 2.2E-4
a

Healthy=term healthy monocytes,

b

Chorio=term chorioamnionitis-exposed monocytes,

c

U=term healthy unstimulated,

d

L=term healthy LPS stimulated,

e

CU=term chorioamnionitis-exposed unstimulated,

f

CL=term chorioamnionitis-exposed LPS stimulated