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. 2019 Jan 10;19:7. doi: 10.1186/s12911-018-0717-4

Table 5.

AUC obtained by RF on 15 ADE datasets: 4 methods are compared, respectively sl, plain, mc and lr

0.2 0.3 0.5 0.7 0.9 0.95 1.0
D61.1 plain 78.151 80.842 80.817 80.909 84.107 84.801 82.484
mc 76.876 78.132 80.163 78.854 81.259 82.946 81.720
lr 77.978 80.720 79.961 79.675 83.624 83.610 81.510
sl 73.846 78.653 78.928 80.756 83.016 82.412 82.817
E27.3 plain 51.916 58.345 56.302 59.870 58.882 62.518 66.854
mc 48.953 50.052 46.695 50.126 61.773 59.444 58.854
lr 58.445 58.637 56.816 61.179 59.170 64.162 67.266
sl 60.763 62.054 59.670 58.718 58.035 64.686 66.500
G62.0 plain 64.443 71.325 75.452 77.247 78.839 79.074 80.279
mc 66.228 72.700 71.376 76.974 74.769 74.146 74.713
lr 64.713 70.756 74.787 77.169 78.992 79.357 79.418
sl 61.473 69.429 76.335 78.379 81.980 81.509 82.222
I95.2 plain 56.157 57.338 54.871 52.257 54.046 59.855 56.369
mc 57.486 57.390 54.750 49.333 53.480 51.742 57.391
lr 58.052 54.797 58.165 53.184 56.145 57.145 56.362
sl 47.671 49.289 51.080 51.509 53.065 54.267 53.943
L27.0 plain 60.374 68.063 66.689 67.815 65.273 67.416 65.322
mc 56.065 62.683 66.766 65.527 67.431 66.443 64.500
lr 56.585 66.422 66.256 67.020 66.277 68.424 66.110
sl 55.400 62.981 61.919 64.648 64.597 65.136 68.271
L27.1 plain 58.130 61.600 63.471 64.835 63.012 62.454 61.798
mc 56.093 55.029 67.179 61.970 64.556 61.222 62.455
lr 58.636 64.100 65.983 66.264 67.196 63.884 64.012
sl 53.709 61.418 62.955 66.461 66.554 67.397 67.316
M80.4 plain 55.646 54.745 59.375 59.029 68.713 67.004 65.396
mc 55.729 55.770 52.641 58.996 66.863 63.000 63.507
lr 55.753 58.056 58.849 59.760 68.912 69.119 67.756
sl 47.933 57.149 52.678 58.414 67.945 65.199 64.845
O35.5 plain 51.650 52.557 64.963 73.161 77.383 78.590 80.298
mc 52.741 52.962 55.361 68.843 70.114 72.079 70.104
lr 52.756 53.551 68.318 76.971 78.332 80.322 81.324
sl 52.401 52.188 67.201 73.696 75.025 78.140 79.142
T78.2 plain 53.028 51.573 56.977 56.538 57.153 58.709 59.229
mc 55.811 54.349 53.146 55.771 53.260 54.417 53.092
lr 52.924 52.369 55.286 59.569 63.066 57.775 59.254
sl 53.113 50.471 50.492 57.561 56.850 58.646 59.421
T78.3 plain 51.177 54.073 52.614 54.575 58.973 59.449 63.647
mc 48.308 50.692 51.378 53.746 56.715 55.334 58.111
lr 51.762 53.238 55.155 56.952 59.213 61.924 66.209
sl 50.514 51.851 54.273 53.531 56.337 59.759 64.728
T78.4 plain 51.937 54.675 58.151 56.976 57.124 56.506 59.162
mc 52.176 55.459 55.644 54.720 53.475 55.145 56.218
lr 54.434 58.122 54.655 57.019 56.627 58.496 58.549
sl 49.903 49.876 47.081 50.235 54.326 56.986 58.444
T80.1 plain 78.962 77.270 84.589 83.097 86.832 85.994 84.189
mc 73.207 72.912 73.492 78.945 74.963 79.334 74.592
lr 78.930 80.478 83.233 83.739 84.677 84.879 85.803
sl 75.125 76.542 79.956 81.759 81.413 83.918 82.726
T80.8 plain 80.744 81.769 83.486 83.704 85.648 86.136 86.751
mc 71.968 71.717 76.488 77.570 78.308 78.182 80.725
lr 81.119 81.211 85.431 85.210 86.319 86.715 86.627
sl 80.537 80.973 84.689 85.569 86.332 86.875 87.351
T88.6 plain 61.998 60.731 62.299 62.830 65.113 63.499 62.249
mc 58.342 58.993 63.476 57.263 59.652 59.568 61.812
lr 60.283 60.159 62.019 63.256 60.864 61.744 64.120
sl 57.623 57.248 57.450 57.417 58.190 57.672 60.403
T88.7 plain 58.971 60.742 62.399 62.239 62.552 63.803 65.352
mc 56.875 57.931 62.472 60.892 63.013 62.435 64.209
lr 60.580 60.462 62.803 61.543 62.588 64.137 66.276
sl 60.297 59.862 61.498 61.811 62.259 64.001 65.139

For each ADE, several sparsity threshold are considered, from 0.2 up to 1.0. The AUC reported for each combination is averaged by cross-validation on 10 different dataset splits. The best result is bold, and the highest AUC for each threshold underlined