Table 3. Summary of RNA-Seq de novo assembly results.
Min length | Mean length | Max length | N50a | N90b | Total nucleotides | |
---|---|---|---|---|---|---|
Transcripts | 201 | 494 | 15,986 | 615 | 230 | 104,198,495 |
Unigenes | 201 | 433 | 15,986 | 456 | 224 | 75,751,538 |
aN50, Transcripts sorted by length from long to short, for which the sum of the length of transcripts was not less than 50% of the total length of mosaic transcripts.
bN90, Transcripts sorted by length from long to short, for which the sum of the length of transcripts was not less than 90% of the total length of mosaic transcripts.