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. 2019 Jan 10;9:24. doi: 10.1038/s41598-018-37208-z

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© The Author(s) 2019

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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The leaf and root microbiota of worldwide Arabidopsis accessions. (a) The relative abundances of major bacterial phyla are shown for each leaf and root sample; samples are plotted in columns along the x-axis. (b) The relative abundances of fungal phyla are shown for leaf and root samples. (c) β diversity in the leaf and root bacterial and fungal microbiome, independent of taxonomic assignments; the lines between points connect samples collected from the same host-plants. The leaf microbial communities of these plants were described earlier. (d) Bacterial and (e) fungal richness (α diversity) in the leaves and roots. As is the case in (c), the lines in (d,e) connect samples collected from the same host plants.