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. 2019 Jan 11;9:59. doi: 10.1038/s41598-018-37276-1

Table 1.

MD simulations carried out in the current study. The aggregated simulation time is 280 ns.

Simulated system Type Counter ions Temperature pH MD run
1 2N0A, WT 9 Na+ 300 K Neutral 20 ns
2 2N0A, WT 9 Na+ 498 K Neutral 20 ns
3 2N0A, WT 16 Cl 300 K Low 20 ns
4 2N0A, WT 16 Cl 498 K Low 20 ns
5 2N0A, Mutant (A30P) 9 Na+ 300 K Neutral 20 ns
6 2N0A, Mutant (A53T) 9 Na+ 300 K Neutral 20 ns
7 2N0A, Mutant (E46K) 7 Na+ 300 K Neutral 20 ns
8 2N0A, Mutant (A30P/A56P/A76P) 9 Na+ 300 K Neutral 20 ns
9 2N0A, Mutant (G73P) 9 Na+ 300 K Neutral 20 ns
10 2N0A, Mutant S129E 10 Na+ 300 K Neutral 20 ns
11 2N0A, Ser(P)-129 10 Na+ 300 K Neutral 20 ns
12 2N0A, ACE-N-terminal 10 Na+ 498 K Neutral 20 ns
13 2KKW, WT 9 Na+ 498 K Neutral 20 ns
14 2KKW, WT 16 Cl 498 K Low 20 ns