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. Author manuscript; available in PMC: 2019 Jan 12.
Published in final edited form as: Rep Prog Phys. 2018 Oct 1;82(1):016601. doi: 10.1088/1361-6633/aae546

Table 1.

Useful numbers for modelling bacterial growth and evolution. All data refers to the bacterium E. coli. If no reference is given, the values come from in-house experiments for the MG1655 strain of E. coli. We also refer the reader to bionumbers [36] - an excellent source of biology-related numbers.

Parameter Value
size typical width 1μm, typical length 2-5μm

exponential growth rate maximum: ~2h–1, sub-optimal conditions: 0.3–1.5 h–1

minimum doubling time ~ 20 min

elongation rate 0.1 – 0.2μm/min (on rich medium)

maximum density ~ 1–5 ×109 cells per ml (LB medium, stationary phase)

mutation rate ~ 2 × 10–10 per bp per replication [30]

glucose molecules consumed to make 1 cell ~ 1.8 × 1010 [26,31]

weight 280 fg per cell [32]

protein molecules per cell 2.35 × 106 (1850 distinct protein molecules) [32]

mRNA molecules per cell 1380 [32]

genome size 4.5 × 106 bp

genome copy number 1 (slow growth) to 8 (fast growth) [33]

abundance of RNA polymerase ~ 1% of total protein mass [34]

abundance of ribosomes (growth rate dependent) ~20-40% of total mass [32]; ~ 7000-70,000 per cell

DNA replication rate 580 - 1,190 bp/s [34]

mRNA elongation rate (transcription) 39-56 nucleotides/s [34]

peptide elongation rate (translation) 13-22 amino acids/s [34]

intracellular concentration of ATP (growth in glucose-fed chemostat) 9.6mM [35]

intracellular concentration of a typical metabolite 0.1-100mM [35]

total intracellular metabolite concentration ~300mM [35]

plasmid size ~2-500kbp

plasmid copy number ~1-200 per cell

minimal inhibitory concentration,
- ampicillin (inhibits cell wall synthesis) ~ 8μg/ml (LB medium)
- rifampicin (RNA synthesis inhibitor) ~ 3μg/ml (LB medium)
- ciprofloxacin (DNA gyrase inhibitor) ~ 20ng/ml (LB medium)