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. Author manuscript; available in PMC: 2020 Feb 1.
Published in final edited form as: Genet Epidemiol. 2018 Oct 18;43(1):102–111. doi: 10.1002/gepi.22168

Table II.

Type I error rate and power under the causal model for a traditional GWAS and ComPaSS-GWAS with indicated parameter settings.

Method Type I error rate Power for SNP with hL2 of
0.01 0.02 0.03
GWAS (critical value 5×10−8) 5.05×10−8 0.231 0.938 0.999
ComPaSS (α = 1×10−3; η = 0.5) 1.28×10−7 0.263 0.956 1
ComPaSS (α = 1×10−3; η = 0.6) 6.03×10−8 0.212 0.903 0.999
ComPaSS (α = 1×10−4; η = 0.2) 7.01×10−9 0.151 0.881 0.999