Table 1.
Core Chemotactic and Flagellar Gene Clusters
| Gene Number | Gene1 name | Gene length - bp (Protein length - aa)1 | Predicted Function1 |
|---|---|---|---|
| Atu0514 | 1707 (568) | Methyl-accepting chemotaxis protein | |
| Atu0515 | cheX | 300 (99) | Chemotaxis protein |
| Atu0516 | cheY1 | 366 (121) | Chemotaxis receiver protein |
| Atu0517 | cheA | 2214 (737) | Chemotaxis histidine kinase |
| Atu0518 | cheR | 909 (302) | Chemotaxis methyltransferase |
| Atu0519 | cheB | 1056 (351) | Chemotaxis methylesterase |
| Atu0520 | cheY2 | 390 (129) | Chemotaxis receiver protein |
| Atu0521 | cheD | 546 (181) | Methyl-accepting chemotaxis protein |
| Atu0522 | 184 (127) | Undefined function | |
| Atu0523 | fliF | 1701 (566) | Flagellar M-ring protein |
| Atu0524 | visN | 681 (226) | LuxR-type transcriptional regulator |
| Atu0525 | visR | 756 (251) | LuxR-type transcriptional regulator |
| Atu0526 | mclA | 1848 (615) | Methyl-accepting chemotaxis protein |
| Atu0542 | fla | 942 (313) | Flagellin |
| Atu0543 | flaB | 963 (320) | Flagellin |
| Atu0544 | 258 (85) | Undefined function | |
| Atu0545 | flaA | 921 (306) | Flagellin |
| Atu0546 | fliP | 738 (245) | Flagellar export protein |
| Atu0547 | fliL | 501 (166) | Flagellar protein |
| Atu0548 | flgH | 720 (239) | Flagellar L-ring precursor |
| Atu0549 | 537 (178) | Undefined function | |
| Atu0550 | flgI | 1122 (373) | Flagellar P-ring precursor |
| Atu0551 | flgA | 489 (162) | Flagellar P-ring protein |
| Atu0552 | flgI | 789 (262) | Flagellar rod protein |
| Atu0553 | fliE | 339 (112) | Flagellar hook-basal body protein |
| Atu0554 | flgC | 420 (139) | Flagellar body-rod protein |
| Atu0555 | flgB | 393 (130) | Flagellar basal body-rod protein |
| Atu0556 | 405 (134) | Undefined function | |
| Atu0557 | fliI | 1422 (473) | Flagellum-specific ATPase |
| Atu0558 | flgF | 735 (244) | Flagellar basal body-rod protein |
| Atu0559 | 636 (211) | Undefined function | |
| Atu0560 | motA | 873 (290) | Flagellar motor protein |
| Atu0561 | fliM | 960 (319) | Flagellar motor switch protein |
| Atu0562 | fliN | 540 (179) | Flagellar motor switch protein |
| Atu0563 | fliG | 1044 (347) | Flagellar motor switch protein |
| Atu0564 | flhB | 1083 (360) | Flagellar export protein |
| Atu0565 | 438 (145) | Undefined function | |
| Atu0566 | 213 (70) | Undefined function | |
| Atu0567 | flaD | 1293 (430) | Flagellin |
| Atu0568 | 657 (218) | Undefined function | |
| Atu0569 | motB | 1302 (433) | Flagellar motor protein |
| Atu0570 | motC | 1281 (426) | Chemotaxis protein |
| Atu0571 | motD | 1350 (449) | Chemotaxis protein |
| Atu0572 | 444 (147) | Undefined function | |
| Atu0573 | rem | 672 (223) | OmpR-type transcriptional regulator |
| Atu0574 | flgE | 1278 (425) | Flagellar hook protein |
| Atu0575 | flgK | 1479 (492) | Flagellar hook-associated protein |
| Atu0576 | flgL | 1104 (367) | Flagellar hook-associated protein |
| Atu0577 | flaF | 345 (114) | Flagellar biosynthesis regulatory protein |
| Atu0578 | flbT | 450 (149) | Flagellar biosynthesis regulatory protein |
| Atu0579 | flgD | 474 (157) | Hook formation protein |
| Atu0580 | fliQ | 267 (88) | Flagellar export protein |
| Atu0581 | flhA | 2088 (695) | Flagellar export protein |
| Atu0582 | fliR | 723 (240) | Flagellar export protein |
| Atu0583 | 420 (139) | Undefined function | |
| Atu0584 | 528 (175) | Undefined function | |
| Atu0585 | 369 (122) | Undefined function | |
| Atu8132 | 534 (177) | Undefined function |
1
Gene identity, length, and predicted function annotations are based on KEGG Gene Ontology (Kyoto University Bioinformatics Center) and Osterman et al. 2015.