Table 3.
tRNAs present in Synurophyceae plastid genomes.
| Synura petersenii S114.C7 | Synura sphagnicola FBCC200022 |
Synura
uvella FBCC200023 |
Mallomonas splendens CCMP1782 | Neotessella volvocina CCMP1781 | Ochromonas sp. CCMP1393 | |
|---|---|---|---|---|---|---|
| trnA(UGC)2 | 2 | 2 | 2 | 2 | 2 | 2 |
| trnC(GCA) | 1 | 1 | 1 | 1 | 1 | 1 |
| trnD(GUC) | 1 | 1 | 1 | 1 | 1 | 1 |
| trnE(UUC) | 1 | 1 | 1 | - | 1Ψ | 1 |
| trnF(GAA) | 1 | 1 | 1 | 1 | 1 | 1 |
| trnG(UCC) | 1 | 1 | 1 | 1 | 1 | 1 |
| trnH(GUG) | 1 | 1 | 1 | 1 | 1 | 1 |
| trnI(GAU)2 | 2 | 2 | 2 | 2 | 2 | 2 |
| trnK(UUU) | 1 | 1 | 1 | 1 | 1 | 1 |
| trnL(UAA) | 1I | 1I | 1I | 1I | - | 1 |
| trnL(CAA) | 1 | - | 1 | 1 | - | - |
| trnL(UAG)2 | 2 | 2 | 2 | 2 | 2 | 2 |
| trnM(CAU)2 | 3 | 4 | 4 | 4 | 4 | 3 |
| trnfM(CAU) | - | - | - | - | - | 1 |
| trnN(GUU)2 | 2 | 2 | 2 | 2 | 2 | 2 |
| trnP(UGG) | 1 | 1 | 1 | 1 | 1+1I | 1 |
| trnQ(UUG) | 1 | 1 | 1 | 1 | 1 | 1 |
| trnR(ACG) | 1 | 1 | 1 | 1 | 1 | 1 |
| trnR(CCG) | 1 | - | - | - | - | - |
| trnR(UCU)2 | 2 Ψ | 2 | 2 Ψ | 2 Ψ | 2 | 2 |
| trnS(GCU) | - | 1 | 1 | 1 | 1I | 1 |
| trnS(UGA)2 | 2 | 2 | 2 | 2 | 2 | 2 |
| trnT(UGU) | 1 | 1 | 1 | 1 | 1 | 1 |
| trnU(UUUU) | 1 | - | - | - | - | - |
| trnV(UAC)2 | 2 | 2 | 2 | 2 | 2 | 2 |
| trnW(CCA) | 1 | 1 | 1 | 1 | 1 | 1 |
| trnY(GUA) | 1 | 1 | 1 | 1 | 1 | 1 |
| Total | 34 | 33 | 34 | 33 | 33 | 33 |
Note. 2present as repeated tRNA genes, Ipresent as intron encoded tRNA genes, Ψpresent as tRNA pseudogene in plastid genome