Table 4.
Haplotype | Frequency | Controls | Patients | Chi Square | P value |
---|---|---|---|---|---|
Block 1 | |||||
CAGC | 0.957 | 0.976 | 0.948 | 7.9 | 0.0049 |
TGTT | 0.020 | 0.004 | 0.028 | 12.198 | 5.0E-4 |
TGGT | 0.016 | 0.018 | 0.016 | 0.076 | 0.7831 |
Block 2 | |||||
CGTTC | 0.493 | 0.509 | 0.486 | 0.88 | 0.3482 |
CGTTT | 0.359 | 0.327 | 0.374 | 3.745 | 0.053 |
CATTT | 0.080 | 0.083 | 0.078 | 0.109 | 0.7409 |
CGCTT | 0.039 | 0.034 | 0.041 | 0.519 | 0.4714 |
CGCCT | 0.015 | 0.011 | 0.024 | 4.493 | 0.034 |
P values < 0.05 after 10,000 permutations are bolded