Table 5.
Cancer vs. Benign∗ (53 vs. 40) | Cancer vs. Normal∗ (53 vs. 38) | Cancer vs. Control (Benign + Normal) (53 vs. 78) | |
---|---|---|---|
Number of ratios that significantly identified with fold change > 1.5 | 28 (Table 2) | 28 (Table 3) | 21 (Table 4) |
Number of ratios selected in the final model | 5 | 4 | 5 |
Name of ratios selected in the final model | hsa-miR-30a-5p/hsa-miR-382-5p, hsa-miR-192-5p/hsa-miR-382-5p, hsa-miR-192-5p/hsa-miR-574-5p, hsa-miR-21-3p/hsa-miR-221-3p, hsa-miR-221-3p/miR-30a-5p (Figure 1) | hsa-miR-324-3p/hsa-miR-382-5p, hsa-miR-21-3p/hsa-miR-324-3p, hsa-miR-30a-5p/has-miR-30e-5p, hsa-miR-221-3p/has-miR-324-3p (Figure 2) | hsa-miR-30e-5p/hsa-miR-382-5p, hsa-miR-221-3p/hsa-miR-324-3p, hsa-miR-30a-5p/hsa-miR-382-5p, hsa-miR-152/hsa-miR-382-5p, hsa-miR-192-5p/hsa-miR-382-5p (Figure 3) |
Sensitivity | 0.881 | 0.890 | 0.717 |
Specificity | 0.775 | 0.925 | 0.782 |
PPV | 0.827 | 0.889 | 0.691 |
NPV | 0.756 | 0.891 | 0.803 |
AUC | 0.901 | 0.901 | 0.820 |
∗Age as a co-founder was included in the model since it significantly differed between two groups. Sensitivity, specificity, PPV, NPV, and AUC were obtained from the final model after 10-fold cross-validation.