Table 2.
Differential expression transcription factors under cadmium stress in cotton root.
| Gene ID | log2Ratio(H0-VS-H1) | log2Ratio(H0-VS-H2) | log2Ratio(H0-VS-H3) | Blast and description | The function of homologous gene in other species |
|---|---|---|---|---|---|
| Up-regulated transcripts | |||||
| CotAD_02717 | 5.229531 | 4.714754 | 5.49896 | Myb domain protein 18[Theobroma cacao] | Positive regulator of the phyA photoresponse |
| CotAD_23906 | 3.424715 | 3.49136 | 4.690159 | Myb domain protein 55 [Theobroma cacao] | involved in Brassinosteroid homeostasis and growth responses |
| CotAD_19868 | 2.710493 | 2.890771 | 3.460425 | Myb domain protein 40 [Theobroma cacao] | function unknown |
| CotAD_76285 | 2.297773 | 2.479582 | 2.641895 | Myb domain protein 40 [Theobroma cacao] | function unknown |
| CotAD_50930 | 1.830316 | 1.64293 | 1.60539 | Myb-like HTH transcriptional regulator protein [Theobroma cacao] | function unknown |
| CotAD_62038 | 1.674672 | 2.007526 | 2.324341 | MYb transcription factor [Gossypium hirsutum] | involved in the response to UV-B |
| CotAD_39114 | 1.063645 | 1.621674 | 2.095315 | Myb domain protein 55 [Theobroma cacao] | involved in Brassinosteroid homeostasis and growth responses |
| CotAD_48495 | 2.645083 | 2.98263 | 3.303392 | GATA transcription factor 9 [Theobroma cacao] | function unknown |
| CotAD_23031 | 2.341828 | 2.160992 | 2.989946 | GATA transcription factor 9 [Theobroma cacao] | function unknown |
| CotAD_75922 | 1.556025 | 1.49199 | 2.442026 | GATA transcription factor 9 [Theobroma cacao] | function unknown |
| CotAD_59298 | 1.369646 | 1.944693 | 2.293563 | GATA transcription factor 2 [Theobroma cacao] | positive regulator of photomorphogenesis |
| CotAD_36519 | 1.357823 | 2.199698 | 1.54739 | GATA zinc finger protein regulating nitrogen assimilation [Theobroma cacao] | function unknown |
| CotAD_55882 | 1 | 1.053503 | 1.195975 | GATA zinc finger protein regulating nitrogen assimilation [Theobroma cacao] | function unknown |
| CotAD_38727 | 2.49114 | 3.372333 | 2.093109 | Zinc finger protein [Theobroma cacao] | involved in secondary wall biosynthesis |
| CotAD_30228 | 1.973305 | 2.385891 | 2.909453 | C2H2-type zinc finger family protein[Theobroma cacao] | function unknown |
| CotAD_53425 | 3.342392 | 3.1836 | 3.336963 | Basic-leucine zipper transcription factor family protein [Theobroma cacao] | involved in lipid metabolism or cellular transpor |
| CotAD_16854 | 1.905141 | 2.242857 | 2.20543 | Basic-leucine zipper transcription factor family protein [Theobroma cacao] | involved in lipid metabolism or cellular transpor |
| CotAD_21422 | 1.999432 | 1.737874 | 1.377638 | Integrase-type DNA-binding superfamily protein[Theobroma cacao] | involved in ethylene signaling pathways |
| CotAD_11710 | 1.654185 | 1.162601 | 2.048023 | ethylene-responsive element-binding protein 5 [Gossypium barbadense] | involved in ethylene signaling pathways |
| CotAD_61187 | 1.843845 | 2.563242 | 1.513578 | LOB domain-containing protein 4 | function unknown |
| Dn-regulated transcripts | |||||
| CotAD_13693 | −2.066401 | −2.447005 | −3.066401 | Basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Theobroma cacao] | involved in iron homeostasis |
| CotAD_55579 | −2.024977 | −1.152438 | −3.169925 | Basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Theobroma cacao] | involved in iron homeostasis |
| CotAD_12483 | −1.683411 | −1.834735 | −2.361483 | Basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Theobroma cacao] | involved in Interactions between Ethylene and Auxin |
| CotAD_54397 | −1.374919 | −1.533229 | −1.290792 | Basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Theobroma cacao] | involved in Interactions between Ethylene and Auxin |
| CotAD_08994 | −1.201244 | −1.241635 | −1.704707 | Basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Theobroma cacao] | involved in salicylic-dependent defense signaling response |
| CotAD_50063 | −1.613672 | −2.009292 | −1.449406 | NAC domain protein 9 [Gossypium hirsutum] | function unknown |
| CotAD_73593 | −1.210922 | −1.524039 | −1.079658 | NAC domain protein 9 [Gossypium hirsutum] | function unknown |
| CotAD_70812 | −1.214829 | −2.034157 | −1.538036 | Myb-like transcription factor family protein [Theobroma cacao] | function unknown |