Table 4.
Serial No. | Repeat Motif | Number of Reiterations of the Motif | Total | |||||||
---|---|---|---|---|---|---|---|---|---|---|
5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | |||
1 | AG/CT | # | 456 | 285 | 217 | 189 | 192 | 81 | 3 | 1423 |
2 | AAG/CTT | 576 | 358 | 137 | 6 | 0 | 0 | 0 | 0 | 1077 |
3 | ATC/ATG | 159 | 74 | 25 | 0 | 0 | 0 | 0 | 0 | 258 |
4 | AT/AT | # | 95 | 54 | 36 | 18 | 14 | 2 | 1 | 220 |
5 | AAT/ATT | 97 | 50 | 19 | 2 | 0 | 0 | 0 | 0 | 168 |
6 | AGG/CCT | 90 | 41 | 12 | 1 | 0 | 0 | 0 | 0 | 144 |
7 | AGC/CTG | 83 | 24 | 9 | 1 | 0 | 0 | 0 | 0 | 117 |
8 | ACC/GGT | 52 | 32 | 6 | 1 | 0 | 0 | 0 | 0 | 91 |
9 | AAC/GTT | 49 | 24 | 14 | 2 | 0 | 0 | 0 | 0 | 89 |
13 | CCG/CGG | 49 | 17 | 3 | 0 | 0 | 0 | 0 | 0 | 69 |
10 | AC/GT | # | 28 | 17 | 10 | 4 | 3 | 0 | 1 | 63 |
11 | ACG/CGT | 24 | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 34 |
12 | ACT/AGT | 15 | 5 | 2 | 2 | 0 | 0 | 0 | 0 | 24 |
14 | CG/CG | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
15 | Other motifs * | 95 | 18 | 0 | 0 | 0 | 0 | 0 | 0 | 113 |
Total | 1289 | 1233 | 583 | 278 | 211 | 209 | 83 | 5 | 3891 |
Note: * indicated tetra-, penta-, and hexa-nucleotide motifs in our study; # means that this item was not considered when detecting EST-SSRs.