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. 2019 Jan 15;9:136. doi: 10.1038/s41598-018-36907-x

Table 2.

Classification, distribution, and relative abundance of 16S rRNA-defined bacterial OTUs recovered from root samples of E. purpurea treated with five different concentrations of organic matter in soil.

OTU Phyla Family or genus Average percent/group
T1 T2 T3 T4 T5
T1 0211 Acidobacteria Group 4 0.151* 0.000 0.002 0.000 0.000
0777 Acidobacteria Group 6 0.100* 0.027 0.008 0.000 0.000
0140 Actinobacteria Streptomyces 0.945* 0.096 0.141 0.198 0.053
0470 Actinobacteria Conexibacter 0.224* 0.023 0.049 0.022 0.000
0077 Actinobacteria Aeromicrobium 0.193* 0.117 0.006 0.000 0.024
0307 Bacteroidetes Chryseolinea 0.165* 0.109 0.035 0.019 0.013
0299 Bacteroidetes Chryseolinea 0.126* 0.059 0.017 0.005 0.040
0124 Bacteroidetes Chitinophagaceae 0.308* 0.043 0.018 0.014 0.144
0094 Bacteroidetes Flavobacterium 0.668* 0.039 0.165 0.128 0.122
0500 Bacteroidetes Filimonas 0.120* 0.000 0.000 0.010 0.008
0332 Chloroflexi Ktedonobacter 0.112* 0.084 0.032 0.006 0.011
0342 Chloroflexi Heliothrix 0.131* 0.061 0.041 0.044 0.019
0801 Chloroflexi Levilinea 0.073* 0.017 0.010 0.007 0.012
0362 Chloroflexi Bellilinea 0.115* 0.020 0.027 0.057 0.000
0478 Firmicutes Unclassified 0.103* 0.069 0.028 0.000 0.011
0649 Firmicutes Aneurinibacillus 0.082* 0.000 0.000 0.006 0.000
0759 Planctomycetes Zavarzinella 0.054* 0.000 0.006 0.000 0.028
0892 Planctomycetes Thermogutta 0.072* 0.028 0.013 0.005 0.000
0164 Alphaproteobacteria Sphingopyxis 0.782* 0.019 0.194 0.021 0.024
0232 Alphaproteobacteria Sphingobium 0.178* 0.002 0.028 0.079 0.006
0904 Alphaproteobacteria Oceanibaculum 0.088* 0.016 0.006 0.007 0.000
1040 Verrucomicrobia Terrimicrobium 0.055* 0.000 0.000 0.000 0.000
0400 Verrucomicrobia Spartobacteria 0.123* 0.011 0.003 0.036 0.005
T3 0506 Firmicutes Bacillus 0.000 0.015 0.091* 0.006 0.006
0005 Gammaproteobacteria Enterobacteriaceae 2.679 8.240 10.270* 6.820 3.468
0184 Gammaproteobacteria Stenotrophomonas 0.029 0.000 0.080* 0.056 0.025
T5 0259 Bacteroidetes Flavisolibacter 0.034 0.026 0.004 0.050 0.122*
0198 Alphaproteobacteria Asticcacaulis 0.139 0.057 0.016 0.095 0.296*
0246 Betaproteobacteria Cupriavidus 0.053 0.058 0.085 0.011 0.469*
0644 Verrucomicrobia Subdivision 3 0.017 0.000 0.000 0.000 0.139*

OTUs shown were detected in at least two out of six replicates per treatment condition. Percent organic matter in soil: T1 (67.5%) – T2 (23.2%) – T3 (10.4%) – T4 (5.6%) – T5 (2.5%). A total of 48,197 16 S rRNA gene sequences were analyzed for treatment T1, 26,471 for T2, 64,655 for T3, 18,555 for T4, and 40,933 for T5.

Significance between treatments indicated by *p < 0.05.