Antibodies |
|
His-affinity tag, mouse monoclonal |
Takara Bio |
Cat#631212 |
XRCC1 Antibody, rabbit polyclonal |
Bio-techne |
Cat#NBP1-87154 |
HRP-conjugated mouse anti-mouse IgG |
GE healthcare |
Cat#NA931 |
|
Bacterial and Virus Strains |
|
NEB 5-alpha Competent E. coli
|
New England Biolabs |
Cat#C2987H |
BL21(DE3) Competent E. coli
|
New England Biolabs |
Cat#C2527I |
|
Chemicals, Peptides, and Recombinant Proteins |
|
[15N] NH4Cl |
CortecNet |
Cat#CN80P10 |
[13C3] glycerol |
CortecNet |
Cat#CC1065P10 |
Isopropyl β-D-1-thiogalactopyranoside |
Generon |
Cat#Gen-S-02122 |
HEPES |
Fisher Scientific |
Cat#10081113 |
NaCl |
Fisher Scientific |
Cat#10735921 |
Imidazole |
Acros Organics |
Cat#301870010 |
TCEP |
Sigma-Aldrich |
Cat#646547 |
cOmplete, EDTA-free Protease Inhibitor Cocktail |
Sigma-Aldrich |
Cat#4693159001 |
Talon resin |
TaKaRa Bio |
Cat#635503 |
Calf thymus histones |
Sigma-Aldrich |
Cat#H9250 |
Tris-HCl |
Fisher Scientific |
Cat#10316893 |
MgCl2
|
Fisher Scientific |
Cat#10386743 |
NAD+ |
Sigma-Aldrich |
Cat#N8410 |
trichloroacetic acid |
Fisher Scientific |
Cat#10775151 |
EDTA |
Fisher Scientific |
Cat#10716481 |
KOH |
Fisher Scientific |
Cat#10448990 |
Ammonium acetate |
Fisher Scientific |
Cat#10365260 |
Guanidine HCl |
Acros Organics |
Cat#120230025 |
3-Aminophenylboronic acid monohydrate |
Sigma-Aldrich |
Cat#287512 |
Bio-Rex 70 Cation Exchange Resin |
Bio-Rad |
Cat#1425822 |
Urea |
Fisher Scientific |
Cat#10578260 |
Bromophenol blue |
Fisher Scientific |
Cat#10679733 |
Xylene cyanol |
Sigma-Aldrich |
Cat#X4126 |
Pierce Color Silver Stain Kit |
Fisher Scientific |
Cat#10096113 |
D2O |
Sigma-Aldrich |
Cat#151882 |
6% DNA Retardation Gel |
Fisher Scientific |
Cat#12080086 |
Tris-borate-EDTA |
Fisher Scientific |
Cat#10542985 |
Gibson Assembly |
New England Biolabs |
Cat#E2611L |
human PARP1 |
Trevigen |
Cat#4668-02K-01 |
Tween 20 |
Sigma-Aldrich |
Cat#P9416 |
3,3′,5,5′-tetramethylbenzidine |
Sigma-Aldrich |
Cat#T4319 |
Triton X-100 |
Sigma-Aldrich |
Cat#T9284 |
Dulbecco’s Phosphate-Buffered Saline (PBS) |
ThermoFisher Scientific |
Cat#14190136 |
Hoechst 34580 |
Sigma-Aldrich |
Cat#63493 |
Dulbecco’s modified Eagle’s medium (DMEM) |
ThermoFisher Scientific |
Cat#21969035 |
Foetal bovine serum |
Sigma-Aldrich |
Cat#F7524 |
Glutamine |
ThermoFisher Scientific |
Cat#25030081 |
Penicillin-Streptomycin |
Sigma-Aldrich |
Cat#P4333 |
Genejuice |
Novagen |
Cat#70967 |
Blasticidin |
InvivoGen |
Cat#ant-bl-1 |
Methyl methanesulfonate |
Sigma-Aldrich |
Cat#129925 |
Low-gelling-temperature agarose, Type VII-A |
Sigma-Aldrich |
Cat#A0701 |
DMSO |
Sigma-Aldrich |
Cat#276855 |
SybrGreen I |
Fisher Scientific |
Cat#S7563 |
Hydrogen peroxide |
Sigma-Aldrich |
Cat#H1009 |
Paraformaldehyde |
Agar Scientific |
Cat#AGR1026 |
Hoechst 33342 |
Sigma-Aldrich |
Cat#B2261 |
ECL reagent |
Fisher Scientific |
Cat#10455145 |
PD MidiTrap G-10 column |
Sigma-Aldrich |
Cat#GE28-9180 |
Tankyrase 1 |
(Elliott et al., 2015) |
N/A |
|
Deposited Data |
|
Biological Magnetic Resonance Bank |
|
27598 |
|
Experimental Models: Cell Lines |
|
Osteosarcoma U2-OS |
Genome Damage and Stability Centre cell repository |
ID: U2-OS |
|
Oligonucleotides |
|
Oligonucleotides for DNA-binding experiments, see Figure S1. |
Integrated DNA Technologies |
N/A |
|
Recombinant DNA |
|
pET15b |
Novagen |
69661 |
peGFP-N1 |
Clontech |
6085-1 |
pET15b-SUMO-XRCC1-BRCT1 |
This paper |
N/A |
|
Software and Algorithms |
|
GraphPad Prism7 for Mac OS X |
Graphpad |
https://www.graphpad.com/scientific-software/prism/ |
SlideBook 6 |
3i |
https://www.intelligent-imaging.com/slidebook |
CcpNmr Analysis |
Collaborative Computing Project for NMR |
https://www.ccpn.ac.uk/ |
Comet Assay IV software |
Perceptive Instruments |
http://www.scorecomets.com/comet-scoring/comet-assay-iv |
Harmony high-content analysis software |
PerkinElmer |
Cat#HH17000001 |
ImageJ64 |
ImageJ Software |
https://imagej.nih.gov/ij/ |
|
Other |
|
BD FACSMelody |
BD Biosciences |
N/A |
Operetta CLS high-content analysis system |
PerkinElmer |
Cat#HH16000000 |
3i Spinning Disk Confocal microscope |
3i |
N/A |