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. 2019 Jan 10;9:3286. doi: 10.3389/fmicb.2018.03286

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Copyright © 2019 Richter, Fazli, Schmid, Shilling, Suppiger, Givskov, Eberl and Tolker-Nielsen.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Domain structure of GGDEF/EAL/HD-GYP proteins of B. cenocepacia H111. Proteins were identified by comparative BLAST analysis of well described GGDEF-, EAL- and HDY-GYP domains from E. coli and X. campestris (see text for details). Protein sequences were analyzed with Pfam and NCBI-CDD web tools. Transmembrane domains (gray squares) were verified with the TMHMM web tool. GGDEF domains are highlighted in red, EAL domains in blue and HD-GYP domains in violet, sensor domains in yellow or green. If a protein name has been assigned, it is also shown here.