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. 2019 Jan 10;9:3332. doi: 10.3389/fmicb.2018.03332

Table 1.

Percent GC content and nucleotide identity between posited chromosomal donors and the corresponding mobilized resistance genes for a number of antibiotics.

Putative donor %GC Mobile determinant %GC % Identity PMID
Sulfonamide Leptospira interrogans 32.62 Salmonella enterica sul3 (WP_117344859.1) 37.75 51.91 (This work)
Leptospiraceae 39.39 ± 4.17 sul3 group 38.14 ± 0.55 49.73 ± 1.55 (This work)
Spirochaetales 52.22 ± 9.24 sul3 group 38.14 ± 0.55 47.28 ± 2.63 (This work)
Parvibaculum lavamentivorans 64.48 Pasteurella multocida sul2 (WP_010890206.1) 60.61 63.33 (This work)
Rhodobiaceae 62.02 ± 2.22 sul2 group 59.6 ± 2.70 60.46 ± 2.37 (This work)
Alphaproteobacteria 62.34 ± 13.20 sul2 group 59.6 ± 2.70 48.14 ± 3.28 (This work)
Parvibaculum lavamentivorans 64.48 Acinetobacter baumannii sul1 (AFB76381.1) 61.78 54.65 (This work)
Rhodobiaceae 62.02 ± 2.22 sul1 group 61.72 ± 0.09 54.06 ± 0.51 (This work)
Alphaproteobacteria 62.34 ± 13.20 sul1 group 61.72 ± 0.10 46.50 ± 3.48 (This work)
Vancomycin Amycolatopsis orientalis 64.86 vanX 64.59 76.57 22303296
Quinolones Shewanella algae 53.12 qnrA 53.27 95.6 16048974
Vibrio splendidus 44.44 qnrS 43.99 72.78 17452482
β-lactams Kluyvera cryocrescens 54.02 CTX-M-1 54.11 99.3 11709346
Kluyvera ascorbata 56.62 CTX-M-2 56.73 99.2 12183268
Kluyvera georgiana 57.07 CTX-M-8 57.08 98.5 12435721
Kluyvera georgiana 57.64 CTX-M-9 60.5 99 15855541
Kluyvera georgiana 57.53 CTX-M-25 57.99 95.9 20421403

Groups of homologs for sul genes correspond to sequences with at most 90% similarity to reported sul genes. For each donor clade and target group, the most likely mapping is shown. Where appropriate, the PudMed identifier (PMID) for the reference establishing the correspondence between putative chromosomal donor and mobile resistance determinant is provided.