Table 1. Efficiency obtained before and after selection of 5-FOA by PCR amplification at the mutated locus and sequence verified.
Gene targeting | Constructs | sgRNA | Method | Before 5-FOA | After 5-FOA |
---|---|---|---|---|---|
albA− Codon stop insertion |
cDNA006 X-pyrG-X |
sgRNA001 | Non-selective | 19 white colonies 5 black colonies (79% white colonies) |
8 white colonies 2 black colonies |
albA− Deletion of 1000 bp |
cDNA008 X-pyrG |
sgRNA001 | Selective | 20 white colonies 8 black colonies (71% white colonies) |
7 white colonies 0 black colonies |
ΔglaA Gene replacement with A5IL97 |
cDNA009 A5IL97-X-pyrG |
sgRNA002 sgRNA003 |
Selective | 8 colonies with pyrG at the locus 2 colonies without pyrG at the locus |
8 on target 0 off target |
ΔmstC Gene deletion |
cDNA010 X-pyrG |
sgRNA004 sgRNA005 |
Selective | 7 colonies with pyrG at the locus 3 colonies without pyrG at the locus |
7 on target 0 off target |