Table 1. Sampling of residues by the different docking methods, within the entire protein and on the interface only, using all docked complexes, and using only a subset of docked complexes where the interface is made of 9 residues.
Docking Method | % total residues sampled | % Interface residues sampled |
% total residues sampled in 9-residue patches | % Interface residues sampled in 9-residue patches |
---|---|---|---|---|
ZDOCK | 72.1 | 97.5 | 40.7 | 39.6 |
GRAMM | 85.9 | 99.6 | 54.6 | 76.8 |