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. 2019 Jan 17;10:272. doi: 10.1038/s41467-018-08045-5

Table 1.

Properties of DNA-guided TtAgo binding to DNA targets with different extents of complementarity to the guide-strand at various temperatures

kon (M−1 s−1)
23°C 37°C 45°C 55°C
Fully complementary 6.5 ± 0.1 × 107 8.5 ± 0.1 × 107 12.0 ± 0.1 × 107 11.1 ± 0.1 × 107
Seed-matched 7.0 ± 0.1 × 107 6.9 ± 0.1 × 107 9.0 ± 0.1 × 107 12.0 ± 0.1 × 107
Seed-matched + 3′ sup. pairing 7.5 ± 0.1 × 107 5.5 ± 0.1 × 107 9.0 ± 0.1 × 107 13.5 ± 0.1 × 107
koff (s−1)
23°C 37°C 45°C 55°C
Fully complementary « PB « PB « PB « PB
Seed-matched 0.10 ± 0.01 0.61 ± 0.01 2.0 ± 0.1 18.0 ± 0.3
Seed-matched + 3′ sup. pairing 0.09 ± 0.01 0.67 ± 0.01 2.0 ± 0.1 13.2 ± 0.3

Values of kon and koff were derived from data collected from several hundred individual DNA target molecules ( > 1100); standard error from bootstrapping is reported. Representative fluorescence intensity time traces and rastergrams summarizing traces of individual target molecules are shown in Supplementary Fig. 2