Table 1.
Genes specifically expressed at the pediveliger stage of Crassostrea gigas according to the selection of RPKM from transcriptomic data published by Zhang et al. (2012) [24].
| Group | Ensembl Gene ID | Protein ID | Name | Cell. Loc. |
|---|---|---|---|---|
| Hypothetical protein | CGI_10014580 | EKC18206 | Hypothetical protein CGI_10014580 | Mit 0.58 |
| CGI_10010208 | EKC18972 | Hypothetical protein CGI_10010208 | Ext 1 | |
| CGI_10004853 | EKC21005 | Hypothetical protein CGI_10004853 | Ext 0.42 | |
| CGI_10002578 | EKC22248 | Hypothetical protein CGI_10002578 | Ext 0.89 | |
| CGI_10001746 | EKC22673 | Hypothetical protein CGI_10001746 | Ext 0.90 | |
| CGI_10013335 | EKC23310 | Hypothetical protein CGI_10013335 | Nuc 0.50 | |
| CGI_10013386 | EKC24388 | Hypothetical protein CGI_10013386 | Ext 0.41 | |
| CGI_10005578 | EKC25384 | Hypothetical protein CGI_10005578 | Ext 0.43 | |
| CGI_10013385 | EKC24387 | Hypothetical protein CGI_10013385 | Ext 0.60 | |
| CGI_10003237 | EKC27225 | Hypothetical protein CGI_10003237 | Ext 0.99 | |
| CGI_10025142 | EKC28625 | Hypothetical protein CGI_10025142 | Ext 0.91 | |
| CGI_10009961 | EKC31321 | Hypothetical protein CGI_10009961 | Ext 0.99 | |
| CGI_10025191 | EKC32101 | Hypothetical protein CGI_10025191 | Cyt 0.38 | |
| CGI_10012470 | EKC33059 | Hypothetical protein CGI_10012470 | Ext 0.99 | |
| CGI_10016093 | EKC35263 | Hypothetical protein CGI_10016093 | Ext 0.52 | |
| CGI_10016094 | EKC35264 | Hypothetical protein CGI_10016094 | Ext 0.52 | |
| CGI_10027526 | EKC35968 | Hypothetical protein CGI_10027526 | ER 0.40 | |
| CGI_10026725 | EKC38958 | Hypothetical protein CGI_10026725 | Ext 0.62 | |
| CGI_10022908 | EKC41146 | Hypothetical protein CGI_10022908 | ER 0.25 | |
| CGI_10008429 | EKC41249 | Hypothetical protein CGI_10008429 | Ext 0.90 | |
| CGI_10013282 | EKC42653 | Hypothetical protein CGI_10013282 | Nuc 0.59 | |
| Enzyme | CGI_10009044 | EKC19270 | Putative tyrosinase-like protein tyr 1 | Mem 0.82 |
| CGI_10014286 | EKC25254 | Putative tyrosinase-like protein tyr-3 | Mem 0.99 | |
| CGI_10006802 | EKC29117 | Tyrosinase-like protein 1 | Ext 0.64 | |
| CGI_10016593 | EKC32997 | Peroxidase-like protein | Ext 0.49 | |
| CGI_10010889 | EKC32754 | Carbonic anhydrase 2 | Cyt 0.41 | |
| CGI_10011324 | EKC18733 | Carbonic anhydrase 7 | Ext 0.65 | |
| CGI_10003099 | EKC28981 | Cell surface hyaluronidase-like | Plast 0.39 | |
| CGI_10003100 | EKC28982 | Cell migration-inducing and hyaluronan-binding protein-like | Cyt 0.29 | |
| CGI_10007190 | EKC19955 | Metalloendopeptidase | Ext 0.39 | |
| CGI_10007191 | EKC19956 | Metalloendopeptidase | Ext 0.51 | |
| CGI_10020760 | EKC31184 | Zinc metalloproteinase nas-15 | Ext 0.70 | |
| Protease inhibitor | CGI_10010154 | EKC18991 | Serine protease inhibitor dipetalogastin-like | Ext 0.55 |
| CGI_10010155 | EKC18992 | Serine protease inhibitor dipetalogastin-like | Ext 1 | |
| Structural protein | CGI_10005627 | EKC20685 | Hemicentin-1 | Ext 0.72 |
| CGI_10010553 | EKC18864 | IgGFc-binding protein (zonadhesin-like) | Ext 0.64 | |
| CGI_10010554 | EKC18865 | IgGFc-binding protein (zonadhesin-like) | Ext 0.72 | |
| CGI_10010555 | EKC18866 | IgGFc-binding protein (zonadhesin-like) | Ext 0.93 | |
| CGI_10010556 | EKC18867 | IgGFc-binding protein (zonadhesin-like) | Ext 0.60 | |
| CGI_10010557 | EKC18868 | IgGFc-binding protein (zonadhesin-like) | Ext 0.91 | |
| CGI_10023170 | EKC34632 | IgGFc-binding protein | Ext 0.52 | |
| CGI_10010465 | EKC34579 | Tenascin-X | Ext 0.80 | |
| CGI_10000981 | EKC39076 | Tenascin-R | Ext 0.84 | |
| CGI_10025295 | EKC40994 | Multiple EGF-like domains 10 | Ext 0.42 | |
| CGI_10013281 | EKC42652 | Tenascin-R | Ext 0.99 | |
| CGI_10010827 | EKC18813 | Collagen-like protein 7 | Ext 0.89 | |
| CGI_10010374 | EKC27350 | Collagen-like protein 7 | Mem 0.56 | |
| CGI_10010375 | EKC27351 | Collagen-like protein 7 | Mem 0.72 | |
| CGI_10011175 | EKC27706 | Collagen alpha-5(VI) chain | Ext 0.55 | |
| Calcification-related protein and calcium-binding protein | CGI_10010615 | EKC18891 | Aggrecan core protein | Ext 0.79 |
| CGI_10006917 | EKC42164 | Asialoglycoprotein receptor 2 | Ext 0.99 | |
| CGI_10006919 | EKC42165 | Perlucin-like protein | Ext 0.95 | |
| CGI_10006920 | EKC42166 | C-type mannose receptor 2 | Ext 0.90 | |
| CGI_10006921 | EKC42167 | Perlucin-like protein | Ext 0.99 | |
| CGI_10006922 | EKC42168 | Perlucin-like protein | Ext 0.99 | |
| CGI_10008331 | EKC19532 | Protocadherin Fat 4-like | Lys 0.36 | |
| CGI_10018326 | EKC34251 | Protocadherin Fat 4 | Cyt 0.72 | |
| CGI_10022907 | EKC41145 | Protocadherin Fat 4-like | Cyt 0.44 | |
| CGI_10006247 | EKC20329 | Putative calmodulin | Cyt 0.48 |
Cell. Loc. indicates the subcellular localization prediction of the corresponding protein by DeepLoc 1.0. Ext: extracellular, Cyt: cytoplasm, Lys: lysosome, Mit: mitochondria, Pla: plastid, Mem: cell membrane, ER: endoplasmic reticulum, Nuc: nucleus.