Table 2.
Numbers of BLASTP hits for genes implicated in bacterial cold shock response in all strains used.
| Gene 1 | Description | Number of BLASTP Hits | |||
|---|---|---|---|---|---|
| Synechococcus sp. SynAce01 | Synechococcus sp. WH8102 | P. marinus MED4 | S. elongatus PCC 7942 | ||
| aceF | Pyruvate dehydrogenase E2 component | 1 | 1 | 1 | 1 |
| csp-family | Cold shock protein/cold-inducible RNA chaperone | 2 | 3 | 2 | 3 |
| deaD | DEAD-like RNA helicase | 2 | 2 | 1 | 0 |
| desA | Fatty acid desaturase | 2 | 2 | 2 | 0 |
| dnaA | Replication initiation protein | 1 | 1 | 1 | 1 |
| dnaJ | Molecular chaperone | 8 | 7 | 5 | 5 |
| gyrA | DNA gyrase subunit A | 1 | 2 | 2 | 2 |
| infA | Translation initiation factor IF-1 | 1 | 1 | 1 | 1 |
| infB | Translation initiation factor IF-2 | 1 | 1 | 1 | 1 |
| infC | Translation initiation factor IF-3 | 1 | 1 | 1 | 1 |
| mtnA | Translation initiation factor IF-2B subunit alpha | 1 | 1 | 0 | 1 |
| nusA | Transcription termination factor | 1 | 1 | 1 | 1 |
| pdhA | Pyruvate dehydrogenase E1 subunit alpha | 1 | 1 | 2 | 1 |
| pdhB | Pyruvate dehydrogenase E1 subunit beta | 1 | 1 | 1 | 1 |
| rbfA | Ribosome-binding factor A | 1 | 1 | 1 | 1 |
| recA | Recombination and DNA repair | 1 | 1 | 1 | 1 |
| tig | Protein-folding chaperone | 1 | 1 | 1 | 1 |
1 Genes implicated in bacterial cold shock response were derived from Barria et al. [24].