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. 2019 Jan 9;9:3262. doi: 10.3389/fmicb.2018.03262

Table 4.

Genes potentially associated with PGP and drought tolerance in actinobacterial strain WZS021 genome.

Gene name EC NO. Annotation aLocation
nifU - Nitrogen fixation protein NifU Contig6: 1111049-516, +
acdS 3.5.99.7 1-aminocyclopropane-1-carboxylate deaminase Contig6: 1137101-8117, +
iaaM 1.13.12.3 Tryptophan 2-monooxygenase Contig14: 436093-7796, +
trkA1 - Trk system potassium uptake protein TrkA Contig7: 150076-753, -
trkA2 - Trk system potassium uptake protein TrkA Contig7: 150753-1343, -
gdh 1.4.1.2 Glutamate dehydrogenase Contig3: 456561-61492, -
pit - Inorganic phosphate transporter, PiT family Contig3: 1149688-50686, +
pstA - Phosphate transport system permease protein Contig3: 1144956-6017, +
pstC - Phosphate transport system permease protein Contig3: 1144099-959, +
pstS - Phosphate transport system substrate-binding protein Contig3: 1142724-3857, +
pstB - Phosphate transport system ATP-binding protein Contig3: 1146072-848, +
sod 1.15.1.1 Superoxide dismutase Contig1: 576667-7062, +
sod 1.15.1.1 Superoxide dismutase, Fe-Mn family Contig6: 36444-7085, -
entS - MFS transporter, ENTS family, enterobactin (siderophore) exporter Contig16: 383107-4405, -
celA 3.2.1.4 Endo-1,4-β-glucanase Contig3: 251986-2939, -
celK1 3.2.1.91 1,4-β-glucancellobiosidase Contig5: 375-1367, -
celK2 3.2.1.91 1,4-β-glucancellobiosidase Contig5: 1259-2617, -
bglB 3.2.1.21 β-glucosidase Contig3: 209992-11410, +
bglX 3.2.1.21 β-glucosidase Contig6: 432656-4236, +
bglF 3.2.1.21 β-glucosides-specific IIA component Contig14: 527479-928, -
malZ 3.2.1.20 α-glucosidase Contig6: 1086477-8102, +
aglE - α-glucoside transport system substrate-binding protein Contig6: 1088150-9481, +
aglF - α-glucoside transport system permease protein Contig6: 1089488-90852, +
aglG - α-glucoside transport system permease protein Contig6: 1090849-1688, +
xynA 3.2.1.8 Endo-1,4-β-xylanase Contig16: 271948-3330, -
glaA 3.2.1.3 Glucoamylase Contig14: 19545-21347, -
amyA 3.2.1.1 α-amylase Contig6: 699205-700584, +
chiC 3.2.1.14 Chitinase Contig14: 463794-5032, -
phzE - Phenazine biosynthesis protein phzE Contig6: 829073-30962, -
gabD 1.2.1.16 Succinate-semialdehyde dehydrogenase (NADP+) Contig1: 1173817-5430, -
gabT - 4-aminobutyrate aminotransferase/(S)-3-amino-2-methylpropionate transaminase Contig1: 114960-6294, +
nhaA - Na+/H+ antiporter, NhaA family Contig1: 1632278-3717, +
mnhB - Multicomponent Na+/H+ antiporter subunit B Contig3: 1125318-596, +
mnhC - Multicomponent Na+/H+ antiporter subunit C Contig3: 1124049-909, -
mnhD - Multicomponent Na+/H+ antiporter subunit D Contig3: 1123831-4052, -
mnhF - Multicomponent Na+/H+ antiporter subunit F Contig3: 1127872-8648, +
chaA - Ca2+/H+ antiporter Contig6: 1048548-9648, +
kdpA - K+-transporting ATPase ATPase A chain Contig18: 734321-5982, -
kdpB - K+-transporting ATPase ATPase B chain Contig18: 732189-4321, -
kdpC - K+-transporting ATPase ATPase C chain Contig18: 731514-2182, -
kdpD - Two-component system, OmpR family, sensor histidine kinase KdpD Contig18: 738354-40819, -
kdpE - Two-component system, OmpR family, KDP operon response regulator KdpE Contig7: 148087-770, +
opuD - Glycine betaine transporter Contig7: 1290843-2471, +
treZ 3.2.1.141 Maltooligosyltrehalose trehalohydrolase Contig7: 519440-21185, -
proDH 1.5.99.8 Proline dehydrogenase Contig1: 271970-2854, -
proV - Glycine betaine/proline transport system ATP-binding protein Contig1: 1079765-80868, -
proW - Glycine betaine/proline transport system permease protein Contig1: 1077816-9765, -
proX - Glycine betaine/proline transport system substrate-binding protein Contig1: 1076855-7814, -
plcC - Phospholipase C Contig7: 1215975-8026, +
xdhA - Xanthine dehydrogenase small subunit Contig7: 648675-9565, +
xdhC - Xanthine dehydrogenase accessory factor Contig7: 654207-5364, +
esl 3.1.1.- Esterase/Lipase Contig3: 1159510-60544, -
betA 1.1.99.1 Choline dehydrogenase Contig18: 66766-8439, -
betB - Betaine-aldehyde dehydrogenase Contig1: 135743-7182, -
cspA - Cold shock protein (β-ribbon, CspA family) Contig3: 1004554-760, -